Protein–RNA interactions for Protein: Q4U2R1

Herc2, E3 ubiquitin-protein ligase HERC2, mousemouse

Predictions only

Length 4,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc2Q4U2R1 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC11.51□□□□□ -0.57
Herc2Q4U2R1 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Herc2Q4U2R1 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Herc2Q4U2R1 AC164883.3-201ENSMUST00000227396 1774 ntBASIC11.51□□□□□ -0.57
Herc2Q4U2R1 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Herc2Q4U2R1 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Herc2Q4U2R1 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC11.5□□□□□ -0.57
Herc2Q4U2R1 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC11.5□□□□□ -0.57
Herc2Q4U2R1 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC11.5□□□□□ -0.57
Herc2Q4U2R1 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Herc2Q4U2R1 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Herc2Q4U2R1 Gm27032-201ENSMUST00000183124 1116 ntBASIC11.5□□□□□ -0.57
Herc2Q4U2R1 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC11.5□□□□□ -0.57
Herc2Q4U2R1 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC11.5□□□□□ -0.57
Herc2Q4U2R1 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Herc2Q4U2R1 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Herc2Q4U2R1 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Herc2Q4U2R1 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Herc2Q4U2R1 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC11.5□□□□□ -0.57
Herc2Q4U2R1 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Herc2Q4U2R1 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Herc2Q4U2R1 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Herc2Q4U2R1 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Herc2Q4U2R1 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC11.5□□□□□ -0.57
Herc2Q4U2R1 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC11.49□□□□□ -0.57
Herc2Q4U2R1 AC156016.1-201ENSMUST00000227190 1035 ntBASIC11.49□□□□□ -0.57
Herc2Q4U2R1 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Herc2Q4U2R1 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Herc2Q4U2R1 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Herc2Q4U2R1 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC11.49□□□□□ -0.57
Herc2Q4U2R1 Gm18958-201ENSMUST00000174258 762 ntBASIC11.49□□□□□ -0.57
Herc2Q4U2R1 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Herc2Q4U2R1 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Herc2Q4U2R1 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Herc2Q4U2R1 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Herc2Q4U2R1 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Herc2Q4U2R1 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Herc2Q4U2R1 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC11.49□□□□□ -0.57
Herc2Q4U2R1 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Herc2Q4U2R1 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC11.49□□□□□ -0.57
Herc2Q4U2R1 Gm43073-201ENSMUST00000198200 1189 ntBASIC11.49□□□□□ -0.57
Herc2Q4U2R1 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC11.48□□□□□ -0.57
Herc2Q4U2R1 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC11.48□□□□□ -0.57
Herc2Q4U2R1 Timm23-208ENSMUST00000226683 750 ntBASIC11.48□□□□□ -0.57
Herc2Q4U2R1 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Herc2Q4U2R1 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC11.48□□□□□ -0.57
Herc2Q4U2R1 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Herc2Q4U2R1 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Herc2Q4U2R1 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Herc2Q4U2R1 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Herc2Q4U2R1 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Herc2Q4U2R1 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Herc2Q4U2R1 Gm34391-201ENSMUST00000203706 907 ntBASIC11.48□□□□□ -0.57
Herc2Q4U2R1 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Herc2Q4U2R1 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Herc2Q4U2R1 Gm43672-201ENSMUST00000199072 1731 ntBASIC11.48□□□□□ -0.57
Herc2Q4U2R1 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Herc2Q4U2R1 AC134329.2-201ENSMUST00000217897 428 ntBASIC11.48□□□□□ -0.57
Herc2Q4U2R1 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Herc2Q4U2R1 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Herc2Q4U2R1 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Herc2Q4U2R1 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Herc2Q4U2R1 Gm27704-201ENSMUST00000185094 107 ntBASIC11.47□□□□□ -0.57
Herc2Q4U2R1 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Herc2Q4U2R1 Gm18115-201ENSMUST00000221209 621 ntBASIC11.47□□□□□ -0.57
Herc2Q4U2R1 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Herc2Q4U2R1 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Herc2Q4U2R1 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Herc2Q4U2R1 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC11.47□□□□□ -0.57
Herc2Q4U2R1 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Herc2Q4U2R1 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Herc2Q4U2R1 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Herc2Q4U2R1 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Herc2Q4U2R1 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Herc2Q4U2R1 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Herc2Q4U2R1 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Herc2Q4U2R1 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Herc2Q4U2R1 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Herc2Q4U2R1 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Herc2Q4U2R1 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC11.46□□□□□ -0.58
Herc2Q4U2R1 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC11.46□□□□□ -0.58
Herc2Q4U2R1 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Herc2Q4U2R1 Gm8258-201ENSMUST00000055593 1449 ntBASIC11.46□□□□□ -0.58
Herc2Q4U2R1 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Herc2Q4U2R1 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Herc2Q4U2R1 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Herc2Q4U2R1 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Herc2Q4U2R1 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Herc2Q4U2R1 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Herc2Q4U2R1 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Herc2Q4U2R1 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Herc2Q4U2R1 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Herc2Q4U2R1 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Herc2Q4U2R1 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Herc2Q4U2R1 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Herc2Q4U2R1 Gm43438-201ENSMUST00000198133 379 ntBASIC11.45□□□□□ -0.58
Herc2Q4U2R1 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Herc2Q4U2R1 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Herc2Q4U2R1 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
Herc2Q4U2R1 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC11.45□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms