Protein–RNA interactions for Protein: Q3UV31

Rnf223, RING finger protein 223, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf223Q3UV31 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
Rnf223Q3UV31 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC18.47■□□□□ 0.55
Rnf223Q3UV31 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rnf223Q3UV31 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.47■□□□□ 0.55
Rnf223Q3UV31 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rnf223Q3UV31 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Rnf223Q3UV31 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Rnf223Q3UV31 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rnf223Q3UV31 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Rnf223Q3UV31 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rnf223Q3UV31 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rnf223Q3UV31 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC18.46■□□□□ 0.55
Rnf223Q3UV31 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rnf223Q3UV31 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Rnf223Q3UV31 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Rnf223Q3UV31 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Rnf223Q3UV31 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rnf223Q3UV31 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Rnf223Q3UV31 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rnf223Q3UV31 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Rnf223Q3UV31 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
Rnf223Q3UV31 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Rnf223Q3UV31 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rnf223Q3UV31 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Rnf223Q3UV31 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Rnf223Q3UV31 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Rnf223Q3UV31 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.45■□□□□ 0.54
Rnf223Q3UV31 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.45■□□□□ 0.54
Rnf223Q3UV31 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rnf223Q3UV31 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rnf223Q3UV31 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rnf223Q3UV31 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC18.44■□□□□ 0.54
Rnf223Q3UV31 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Rnf223Q3UV31 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rnf223Q3UV31 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC18.44■□□□□ 0.54
Rnf223Q3UV31 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rnf223Q3UV31 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rnf223Q3UV31 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC18.44■□□□□ 0.54
Rnf223Q3UV31 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Rnf223Q3UV31 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rnf223Q3UV31 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rnf223Q3UV31 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC18.44■□□□□ 0.54
Rnf223Q3UV31 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC18.44■□□□□ 0.54
Rnf223Q3UV31 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rnf223Q3UV31 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rnf223Q3UV31 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rnf223Q3UV31 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Rnf223Q3UV31 Gm5540-201ENSMUST00000131852 1848 ntBASIC18.44■□□□□ 0.54
Rnf223Q3UV31 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rnf223Q3UV31 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Rnf223Q3UV31 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC18.43■□□□□ 0.54
Rnf223Q3UV31 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rnf223Q3UV31 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rnf223Q3UV31 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
Rnf223Q3UV31 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Rnf223Q3UV31 Gm6211-202ENSMUST00000167849 925 ntBASIC18.43■□□□□ 0.54
Rnf223Q3UV31 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rnf223Q3UV31 Spcs1-207ENSMUST00000228767 1008 ntBASIC18.43■□□□□ 0.54
Rnf223Q3UV31 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rnf223Q3UV31 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Rnf223Q3UV31 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rnf223Q3UV31 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rnf223Q3UV31 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Rnf223Q3UV31 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rnf223Q3UV31 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rnf223Q3UV31 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rnf223Q3UV31 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Rnf223Q3UV31 Gm20634-201ENSMUST00000090779 2956 ntBASIC18.42■□□□□ 0.54
Rnf223Q3UV31 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rnf223Q3UV31 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rnf223Q3UV31 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Rnf223Q3UV31 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rnf223Q3UV31 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Rnf223Q3UV31 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Rnf223Q3UV31 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Rnf223Q3UV31 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rnf223Q3UV31 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rnf223Q3UV31 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Rnf223Q3UV31 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rnf223Q3UV31 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC18.41■□□□□ 0.54
Rnf223Q3UV31 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
Rnf223Q3UV31 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC18.41■□□□□ 0.54
Rnf223Q3UV31 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rnf223Q3UV31 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Rnf223Q3UV31 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rnf223Q3UV31 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Rnf223Q3UV31 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.4■□□□□ 0.54
Rnf223Q3UV31 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rnf223Q3UV31 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rnf223Q3UV31 Gm27011-201ENSMUST00000182352 972 ntBASIC18.4■□□□□ 0.54
Rnf223Q3UV31 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rnf223Q3UV31 Gm3807-201ENSMUST00000193520 1168 ntBASIC18.4■□□□□ 0.54
Rnf223Q3UV31 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC18.4■□□□□ 0.54
Rnf223Q3UV31 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rnf223Q3UV31 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC18.4■□□□□ 0.54
Rnf223Q3UV31 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Rnf223Q3UV31 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Rnf223Q3UV31 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rnf223Q3UV31 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Rnf223Q3UV31 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms