Protein–RNA interactions for Protein: Q3USW5

Foxred2, FAD-dependent oxidoreductase domain-containing protein 2, mousemouse

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxred2Q3USW5 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Foxred2Q3USW5 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Foxred2Q3USW5 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Foxred2Q3USW5 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Foxred2Q3USW5 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Foxred2Q3USW5 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Foxred2Q3USW5 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Foxred2Q3USW5 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Foxred2Q3USW5 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Foxred2Q3USW5 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Foxred2Q3USW5 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Foxred2Q3USW5 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Foxred2Q3USW5 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.33■□□□□ 0.69
Foxred2Q3USW5 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Foxred2Q3USW5 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Foxred2Q3USW5 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.69
Foxred2Q3USW5 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Foxred2Q3USW5 CT030146.1-201ENSMUST00000220919 217 ntBASIC19.33■□□□□ 0.68
Foxred2Q3USW5 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Foxred2Q3USW5 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Foxred2Q3USW5 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Foxred2Q3USW5 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Foxred2Q3USW5 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC19.32■□□□□ 0.68
Foxred2Q3USW5 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Foxred2Q3USW5 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Foxred2Q3USW5 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Foxred2Q3USW5 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Foxred2Q3USW5 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Foxred2Q3USW5 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Foxred2Q3USW5 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Foxred2Q3USW5 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Foxred2Q3USW5 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Foxred2Q3USW5 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Foxred2Q3USW5 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Foxred2Q3USW5 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Foxred2Q3USW5 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Foxred2Q3USW5 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC19.31■□□□□ 0.68
Foxred2Q3USW5 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Foxred2Q3USW5 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Foxred2Q3USW5 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC19.31■□□□□ 0.68
Foxred2Q3USW5 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC19.31■□□□□ 0.68
Foxred2Q3USW5 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC19.31■□□□□ 0.68
Foxred2Q3USW5 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC19.31■□□□□ 0.68
Foxred2Q3USW5 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Foxred2Q3USW5 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Foxred2Q3USW5 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Foxred2Q3USW5 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Foxred2Q3USW5 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
Foxred2Q3USW5 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
Foxred2Q3USW5 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Foxred2Q3USW5 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Foxred2Q3USW5 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Foxred2Q3USW5 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Foxred2Q3USW5 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Foxred2Q3USW5 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Foxred2Q3USW5 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Foxred2Q3USW5 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Foxred2Q3USW5 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC19.29■□□□□ 0.68
Foxred2Q3USW5 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Foxred2Q3USW5 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Foxred2Q3USW5 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Foxred2Q3USW5 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Foxred2Q3USW5 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Foxred2Q3USW5 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC19.29■□□□□ 0.68
Foxred2Q3USW5 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Foxred2Q3USW5 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Foxred2Q3USW5 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Foxred2Q3USW5 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Foxred2Q3USW5 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Foxred2Q3USW5 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Foxred2Q3USW5 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Foxred2Q3USW5 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Foxred2Q3USW5 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.29■□□□□ 0.68
Foxred2Q3USW5 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Foxred2Q3USW5 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Foxred2Q3USW5 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Foxred2Q3USW5 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC19.28■□□□□ 0.68
Foxred2Q3USW5 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Foxred2Q3USW5 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Foxred2Q3USW5 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Foxred2Q3USW5 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Foxred2Q3USW5 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Foxred2Q3USW5 Gm14281-201ENSMUST00000121700 1294 ntBASIC19.28■□□□□ 0.68
Foxred2Q3USW5 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Foxred2Q3USW5 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC19.28■□□□□ 0.68
Foxred2Q3USW5 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Foxred2Q3USW5 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Foxred2Q3USW5 Gm9988-201ENSMUST00000069786 435 ntBASIC19.28■□□□□ 0.68
Foxred2Q3USW5 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Foxred2Q3USW5 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC19.28■□□□□ 0.68
Foxred2Q3USW5 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Foxred2Q3USW5 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Foxred2Q3USW5 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Foxred2Q3USW5 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Foxred2Q3USW5 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Foxred2Q3USW5 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Foxred2Q3USW5 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC19.27■□□□□ 0.68
Foxred2Q3USW5 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Foxred2Q3USW5 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Foxred2Q3USW5 Gm7860-201ENSMUST00000121190 879 ntBASIC19.27■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 73.2 ms