Protein–RNA interactions for Protein: Q3URK1

Ccdc190, Coiled-coil domain-containing protein 190, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc190Q3URK1 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc190Q3URK1 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc190Q3URK1 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc190Q3URK1 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Ccdc190Q3URK1 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc190Q3URK1 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc190Q3URK1 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc190Q3URK1 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc190Q3URK1 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC16.63■□□□□ 0.25
Ccdc190Q3URK1 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc190Q3URK1 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc190Q3URK1 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc190Q3URK1 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Ccdc190Q3URK1 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc190Q3URK1 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Ccdc190Q3URK1 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Ccdc190Q3URK1 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc190Q3URK1 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc190Q3URK1 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc190Q3URK1 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC16.62■□□□□ 0.25
Ccdc190Q3URK1 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc190Q3URK1 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc190Q3URK1 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC16.62■□□□□ 0.25
Ccdc190Q3URK1 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc190Q3URK1 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
Ccdc190Q3URK1 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Ccdc190Q3URK1 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC16.62■□□□□ 0.25
Ccdc190Q3URK1 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc190Q3URK1 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc190Q3URK1 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc190Q3URK1 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc190Q3URK1 Fst-202ENSMUST00000223640 2612 ntBASIC16.62■□□□□ 0.25
Ccdc190Q3URK1 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc190Q3URK1 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc190Q3URK1 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc190Q3URK1 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc190Q3URK1 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc190Q3URK1 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc190Q3URK1 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc190Q3URK1 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc190Q3URK1 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC16.61■□□□□ 0.25
Ccdc190Q3URK1 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC16.61■□□□□ 0.25
Ccdc190Q3URK1 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc190Q3URK1 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
Ccdc190Q3URK1 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc190Q3URK1 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC16.61■□□□□ 0.25
Ccdc190Q3URK1 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc190Q3URK1 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc190Q3URK1 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Ccdc190Q3URK1 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc190Q3URK1 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc190Q3URK1 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc190Q3URK1 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc190Q3URK1 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC16.6■□□□□ 0.25
Ccdc190Q3URK1 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc190Q3URK1 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Ccdc190Q3URK1 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Ccdc190Q3URK1 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc190Q3URK1 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC16.6■□□□□ 0.25
Ccdc190Q3URK1 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC16.6■□□□□ 0.25
Ccdc190Q3URK1 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc190Q3URK1 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc190Q3URK1 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc190Q3URK1 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc190Q3URK1 Gm43702-201ENSMUST00000198772 2546 ntBASIC16.6■□□□□ 0.25
Ccdc190Q3URK1 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC16.6■□□□□ 0.25
Ccdc190Q3URK1 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc190Q3URK1 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc190Q3URK1 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc190Q3URK1 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Ccdc190Q3URK1 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc190Q3URK1 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc190Q3URK1 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc190Q3URK1 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc190Q3URK1 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc190Q3URK1 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc190Q3URK1 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc190Q3URK1 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc190Q3URK1 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Ccdc190Q3URK1 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc190Q3URK1 Mir6236-201ENSMUST00000184437 123 ntBASIC16.59■□□□□ 0.25
Ccdc190Q3URK1 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC16.59■□□□□ 0.25
Ccdc190Q3URK1 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc190Q3URK1 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc190Q3URK1 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc190Q3URK1 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc190Q3URK1 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC16.59■□□□□ 0.25
Ccdc190Q3URK1 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc190Q3URK1 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc190Q3URK1 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Ccdc190Q3URK1 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Ccdc190Q3URK1 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Ccdc190Q3URK1 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Ccdc190Q3URK1 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Ccdc190Q3URK1 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Ccdc190Q3URK1 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC16.58■□□□□ 0.24
Ccdc190Q3URK1 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ccdc190Q3URK1 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ccdc190Q3URK1 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ccdc190Q3URK1 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms