Protein–RNA interactions for Protein: Q3UP38

Cracr2a, EF-hand calcium-binding domain-containing protein 4B, mousemouse

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cracr2aQ3UP38 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cracr2aQ3UP38 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Cracr2aQ3UP38 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC20.59■□□□□ 0.89
Cracr2aQ3UP38 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cracr2aQ3UP38 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cracr2aQ3UP38 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cracr2aQ3UP38 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Cracr2aQ3UP38 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cracr2aQ3UP38 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cracr2aQ3UP38 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cracr2aQ3UP38 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Cracr2aQ3UP38 Gm7291-201ENSMUST00000199147 382 ntBASIC20.58■□□□□ 0.89
Cracr2aQ3UP38 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Cracr2aQ3UP38 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC20.58■□□□□ 0.89
Cracr2aQ3UP38 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cracr2aQ3UP38 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Cracr2aQ3UP38 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cracr2aQ3UP38 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cracr2aQ3UP38 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Cracr2aQ3UP38 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC20.57■□□□□ 0.88
Cracr2aQ3UP38 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC20.57■□□□□ 0.88
Cracr2aQ3UP38 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cracr2aQ3UP38 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Cracr2aQ3UP38 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cracr2aQ3UP38 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC20.57■□□□□ 0.88
Cracr2aQ3UP38 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Cracr2aQ3UP38 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cracr2aQ3UP38 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC20.56■□□□□ 0.88
Cracr2aQ3UP38 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cracr2aQ3UP38 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Cracr2aQ3UP38 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Cracr2aQ3UP38 AC164629.5-201ENSMUST00000220387 632 ntBASIC20.56■□□□□ 0.88
Cracr2aQ3UP38 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cracr2aQ3UP38 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cracr2aQ3UP38 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cracr2aQ3UP38 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cracr2aQ3UP38 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Cracr2aQ3UP38 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cracr2aQ3UP38 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cracr2aQ3UP38 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cracr2aQ3UP38 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cracr2aQ3UP38 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
Cracr2aQ3UP38 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cracr2aQ3UP38 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cracr2aQ3UP38 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Cracr2aQ3UP38 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC20.55■□□□□ 0.88
Cracr2aQ3UP38 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC20.55■□□□□ 0.88
Cracr2aQ3UP38 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Cracr2aQ3UP38 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cracr2aQ3UP38 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC20.55■□□□□ 0.88
Cracr2aQ3UP38 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cracr2aQ3UP38 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Cracr2aQ3UP38 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cracr2aQ3UP38 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Cracr2aQ3UP38 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Cracr2aQ3UP38 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Cracr2aQ3UP38 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC20.54■□□□□ 0.88
Cracr2aQ3UP38 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cracr2aQ3UP38 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
Cracr2aQ3UP38 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cracr2aQ3UP38 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cracr2aQ3UP38 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Cracr2aQ3UP38 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Cracr2aQ3UP38 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Cracr2aQ3UP38 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC20.53■□□□□ 0.88
Cracr2aQ3UP38 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
Cracr2aQ3UP38 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cracr2aQ3UP38 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cracr2aQ3UP38 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cracr2aQ3UP38 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cracr2aQ3UP38 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cracr2aQ3UP38 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cracr2aQ3UP38 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Cracr2aQ3UP38 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC20.52■□□□□ 0.88
Cracr2aQ3UP38 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cracr2aQ3UP38 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Cracr2aQ3UP38 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Cracr2aQ3UP38 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC20.52■□□□□ 0.88
Cracr2aQ3UP38 Gm38205-201ENSMUST00000192243 258 ntBASIC20.52■□□□□ 0.88
Cracr2aQ3UP38 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Cracr2aQ3UP38 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cracr2aQ3UP38 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cracr2aQ3UP38 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
Cracr2aQ3UP38 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cracr2aQ3UP38 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Cracr2aQ3UP38 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
Cracr2aQ3UP38 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cracr2aQ3UP38 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC20.51■□□□□ 0.87
Cracr2aQ3UP38 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cracr2aQ3UP38 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cracr2aQ3UP38 Gm7860-201ENSMUST00000121190 879 ntBASIC20.51■□□□□ 0.87
Cracr2aQ3UP38 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cracr2aQ3UP38 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cracr2aQ3UP38 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC20.51■□□□□ 0.87
Cracr2aQ3UP38 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC20.51■□□□□ 0.87
Cracr2aQ3UP38 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cracr2aQ3UP38 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cracr2aQ3UP38 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC20.51■□□□□ 0.87
Cracr2aQ3UP38 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cracr2aQ3UP38 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms