Protein–RNA interactions for Protein: Q3UJV1

Ccdc61, Coiled-coil domain-containing protein 61, mousemouse

Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc61Q3UJV1 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc61Q3UJV1 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc61Q3UJV1 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc61Q3UJV1 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
Ccdc61Q3UJV1 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc61Q3UJV1 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc61Q3UJV1 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc61Q3UJV1 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc61Q3UJV1 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc61Q3UJV1 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC19.68■□□□□ 0.74
Ccdc61Q3UJV1 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Ccdc61Q3UJV1 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc61Q3UJV1 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc61Q3UJV1 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc61Q3UJV1 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Ccdc61Q3UJV1 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Ccdc61Q3UJV1 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Ccdc61Q3UJV1 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc61Q3UJV1 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
Ccdc61Q3UJV1 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc61Q3UJV1 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc61Q3UJV1 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC19.67■□□□□ 0.74
Ccdc61Q3UJV1 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc61Q3UJV1 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc61Q3UJV1 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc61Q3UJV1 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Ccdc61Q3UJV1 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc61Q3UJV1 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc61Q3UJV1 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc61Q3UJV1 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Ccdc61Q3UJV1 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc61Q3UJV1 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc61Q3UJV1 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc61Q3UJV1 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC19.66■□□□□ 0.74
Ccdc61Q3UJV1 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Ccdc61Q3UJV1 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc61Q3UJV1 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc61Q3UJV1 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc61Q3UJV1 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Ccdc61Q3UJV1 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.66■□□□□ 0.74
Ccdc61Q3UJV1 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC19.66■□□□□ 0.74
Ccdc61Q3UJV1 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc61Q3UJV1 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc61Q3UJV1 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ccdc61Q3UJV1 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ccdc61Q3UJV1 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC19.65■□□□□ 0.74
Ccdc61Q3UJV1 AC112142.1-201ENSMUST00000228796 918 ntBASIC19.65■□□□□ 0.74
Ccdc61Q3UJV1 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ccdc61Q3UJV1 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ccdc61Q3UJV1 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Ccdc61Q3UJV1 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ccdc61Q3UJV1 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ccdc61Q3UJV1 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Ccdc61Q3UJV1 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ccdc61Q3UJV1 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Ccdc61Q3UJV1 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
Ccdc61Q3UJV1 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Ccdc61Q3UJV1 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC19.64■□□□□ 0.73
Ccdc61Q3UJV1 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc61Q3UJV1 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc61Q3UJV1 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC19.64■□□□□ 0.73
Ccdc61Q3UJV1 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc61Q3UJV1 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Ccdc61Q3UJV1 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc61Q3UJV1 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc61Q3UJV1 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc61Q3UJV1 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC19.63■□□□□ 0.73
Ccdc61Q3UJV1 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Ccdc61Q3UJV1 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc61Q3UJV1 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc61Q3UJV1 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Ccdc61Q3UJV1 Gm26971-201ENSMUST00000182423 1072 ntBASIC19.63■□□□□ 0.73
Ccdc61Q3UJV1 Gm4968-201ENSMUST00000071458 858 ntBASIC19.63■□□□□ 0.73
Ccdc61Q3UJV1 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc61Q3UJV1 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc61Q3UJV1 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc61Q3UJV1 Gm6211-202ENSMUST00000167849 925 ntBASIC19.62■□□□□ 0.73
Ccdc61Q3UJV1 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc61Q3UJV1 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
Ccdc61Q3UJV1 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC19.62■□□□□ 0.73
Ccdc61Q3UJV1 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC19.62■□□□□ 0.73
Ccdc61Q3UJV1 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc61Q3UJV1 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc61Q3UJV1 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc61Q3UJV1 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc61Q3UJV1 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC19.61■□□□□ 0.73
Ccdc61Q3UJV1 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc61Q3UJV1 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc61Q3UJV1 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc61Q3UJV1 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC19.61■□□□□ 0.73
Ccdc61Q3UJV1 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc61Q3UJV1 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Ccdc61Q3UJV1 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc61Q3UJV1 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Ccdc61Q3UJV1 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ccdc61Q3UJV1 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Ccdc61Q3UJV1 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Ccdc61Q3UJV1 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC19.6■□□□□ 0.73
Ccdc61Q3UJV1 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC19.6■□□□□ 0.73
Ccdc61Q3UJV1 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC19.6■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms