Protein–RNA interactions for Protein: Q3UHK8

Tnrc6a, Trinucleotide repeat-containing gene 6A protein, mousemouse

Known RBP Predictions only

Length 1,896 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnrc6aQ3UHK8 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tnrc6aQ3UHK8 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC17.69■□□□□ 0.42
Tnrc6aQ3UHK8 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tnrc6aQ3UHK8 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC17.69■□□□□ 0.42
Tnrc6aQ3UHK8 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tnrc6aQ3UHK8 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tnrc6aQ3UHK8 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tnrc6aQ3UHK8 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tnrc6aQ3UHK8 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tnrc6aQ3UHK8 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC17.68■□□□□ 0.42
Tnrc6aQ3UHK8 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC17.68■□□□□ 0.42
Tnrc6aQ3UHK8 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC17.68■□□□□ 0.42
Tnrc6aQ3UHK8 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Tnrc6aQ3UHK8 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Tnrc6aQ3UHK8 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
Tnrc6aQ3UHK8 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tnrc6aQ3UHK8 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Tnrc6aQ3UHK8 Gm13181-201ENSMUST00000120117 1069 ntBASIC17.67■□□□□ 0.42
Tnrc6aQ3UHK8 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC17.67■□□□□ 0.42
Tnrc6aQ3UHK8 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tnrc6aQ3UHK8 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tnrc6aQ3UHK8 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Tnrc6aQ3UHK8 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tnrc6aQ3UHK8 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Tnrc6aQ3UHK8 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tnrc6aQ3UHK8 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Tnrc6aQ3UHK8 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Tnrc6aQ3UHK8 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tnrc6aQ3UHK8 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC17.66■□□□□ 0.42
Tnrc6aQ3UHK8 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tnrc6aQ3UHK8 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tnrc6aQ3UHK8 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC17.66■□□□□ 0.42
Tnrc6aQ3UHK8 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC17.66■□□□□ 0.42
Tnrc6aQ3UHK8 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tnrc6aQ3UHK8 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC17.66■□□□□ 0.42
Tnrc6aQ3UHK8 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tnrc6aQ3UHK8 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Tnrc6aQ3UHK8 Gm13509-201ENSMUST00000119733 1308 ntBASIC17.65■□□□□ 0.42
Tnrc6aQ3UHK8 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tnrc6aQ3UHK8 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC17.65■□□□□ 0.42
Tnrc6aQ3UHK8 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tnrc6aQ3UHK8 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tnrc6aQ3UHK8 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
Tnrc6aQ3UHK8 Gm21596-201ENSMUST00000178049 1316 ntBASIC17.65■□□□□ 0.42
Tnrc6aQ3UHK8 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tnrc6aQ3UHK8 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Tnrc6aQ3UHK8 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tnrc6aQ3UHK8 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tnrc6aQ3UHK8 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Tnrc6aQ3UHK8 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC17.65■□□□□ 0.42
Tnrc6aQ3UHK8 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Tnrc6aQ3UHK8 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Tnrc6aQ3UHK8 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Tnrc6aQ3UHK8 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Tnrc6aQ3UHK8 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tnrc6aQ3UHK8 Hsf1-204ENSMUST00000226872 2104 ntBASIC17.64■□□□□ 0.41
Tnrc6aQ3UHK8 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tnrc6aQ3UHK8 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tnrc6aQ3UHK8 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC17.64■□□□□ 0.41
Tnrc6aQ3UHK8 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Tnrc6aQ3UHK8 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tnrc6aQ3UHK8 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tnrc6aQ3UHK8 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tnrc6aQ3UHK8 Gm10616-201ENSMUST00000205285 2127 ntBASIC17.64■□□□□ 0.41
Tnrc6aQ3UHK8 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tnrc6aQ3UHK8 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Tnrc6aQ3UHK8 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Tnrc6aQ3UHK8 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tnrc6aQ3UHK8 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC17.63■□□□□ 0.41
Tnrc6aQ3UHK8 Dio3-201ENSMUST00000097228 1449 ntBASIC17.63■□□□□ 0.41
Tnrc6aQ3UHK8 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tnrc6aQ3UHK8 Gm5643-201ENSMUST00000117081 966 ntBASIC17.63■□□□□ 0.41
Tnrc6aQ3UHK8 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Tnrc6aQ3UHK8 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Tnrc6aQ3UHK8 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tnrc6aQ3UHK8 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Tnrc6aQ3UHK8 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tnrc6aQ3UHK8 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tnrc6aQ3UHK8 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tnrc6aQ3UHK8 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
Tnrc6aQ3UHK8 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Tnrc6aQ3UHK8 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Tnrc6aQ3UHK8 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tnrc6aQ3UHK8 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Tnrc6aQ3UHK8 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Tnrc6aQ3UHK8 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tnrc6aQ3UHK8 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tnrc6aQ3UHK8 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tnrc6aQ3UHK8 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC17.61■□□□□ 0.41
Tnrc6aQ3UHK8 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Tnrc6aQ3UHK8 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tnrc6aQ3UHK8 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC17.61■□□□□ 0.41
Tnrc6aQ3UHK8 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Tnrc6aQ3UHK8 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tnrc6aQ3UHK8 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tnrc6aQ3UHK8 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Tnrc6aQ3UHK8 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Tnrc6aQ3UHK8 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tnrc6aQ3UHK8 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tnrc6aQ3UHK8 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 12.7 ms