Protein–RNA interactions for Protein: Q3UHD6

Snx27, Sorting nexin-27, mousemouse

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx27Q3UHD6 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.89
Snx27Q3UHD6 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Snx27Q3UHD6 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Snx27Q3UHD6 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Snx27Q3UHD6 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Snx27Q3UHD6 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Snx27Q3UHD6 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC20.58■□□□□ 0.88
Snx27Q3UHD6 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC20.58■□□□□ 0.88
Snx27Q3UHD6 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Snx27Q3UHD6 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Snx27Q3UHD6 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Snx27Q3UHD6 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Snx27Q3UHD6 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Snx27Q3UHD6 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Snx27Q3UHD6 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Snx27Q3UHD6 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Snx27Q3UHD6 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC20.57■□□□□ 0.88
Snx27Q3UHD6 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Snx27Q3UHD6 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Snx27Q3UHD6 Gm5540-201ENSMUST00000131852 1848 ntBASIC20.57■□□□□ 0.88
Snx27Q3UHD6 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Snx27Q3UHD6 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Snx27Q3UHD6 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Snx27Q3UHD6 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Snx27Q3UHD6 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Snx27Q3UHD6 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Snx27Q3UHD6 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Snx27Q3UHD6 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Snx27Q3UHD6 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Snx27Q3UHD6 Gm26524-201ENSMUST00000192339 390 ntBASIC20.56■□□□□ 0.88
Snx27Q3UHD6 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC20.56■□□□□ 0.88
Snx27Q3UHD6 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Snx27Q3UHD6 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Snx27Q3UHD6 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Snx27Q3UHD6 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Snx27Q3UHD6 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Snx27Q3UHD6 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Snx27Q3UHD6 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Snx27Q3UHD6 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Snx27Q3UHD6 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
Snx27Q3UHD6 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Snx27Q3UHD6 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Snx27Q3UHD6 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Snx27Q3UHD6 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Snx27Q3UHD6 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC20.55■□□□□ 0.88
Snx27Q3UHD6 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Snx27Q3UHD6 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Snx27Q3UHD6 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Snx27Q3UHD6 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Snx27Q3UHD6 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Snx27Q3UHD6 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Snx27Q3UHD6 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Snx27Q3UHD6 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Snx27Q3UHD6 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Snx27Q3UHD6 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Snx27Q3UHD6 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC20.54■□□□□ 0.88
Snx27Q3UHD6 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Snx27Q3UHD6 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Snx27Q3UHD6 Gm37563-201ENSMUST00000192580 1513 ntBASIC20.53■□□□□ 0.88
Snx27Q3UHD6 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Snx27Q3UHD6 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Snx27Q3UHD6 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC20.53■□□□□ 0.88
Snx27Q3UHD6 Gm10653-202ENSMUST00000139570 835 ntBASIC20.53■□□□□ 0.88
Snx27Q3UHD6 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC20.53■□□□□ 0.88
Snx27Q3UHD6 AC122769.4-201ENSMUST00000228166 901 ntBASIC20.53■□□□□ 0.88
Snx27Q3UHD6 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Snx27Q3UHD6 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Snx27Q3UHD6 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Snx27Q3UHD6 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Snx27Q3UHD6 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Snx27Q3UHD6 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Snx27Q3UHD6 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Snx27Q3UHD6 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
Snx27Q3UHD6 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Snx27Q3UHD6 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Snx27Q3UHD6 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Snx27Q3UHD6 Gm12527-201ENSMUST00000117967 564 ntBASIC20.52■□□□□ 0.88
Snx27Q3UHD6 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC20.52■□□□□ 0.88
Snx27Q3UHD6 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Snx27Q3UHD6 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Snx27Q3UHD6 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Snx27Q3UHD6 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Snx27Q3UHD6 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Snx27Q3UHD6 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Snx27Q3UHD6 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Snx27Q3UHD6 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC20.52■□□□□ 0.87
Snx27Q3UHD6 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Snx27Q3UHD6 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Snx27Q3UHD6 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Snx27Q3UHD6 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Snx27Q3UHD6 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Snx27Q3UHD6 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.51■□□□□ 0.87
Snx27Q3UHD6 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC20.51■□□□□ 0.87
Snx27Q3UHD6 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
Snx27Q3UHD6 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC20.51■□□□□ 0.87
Snx27Q3UHD6 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Snx27Q3UHD6 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Snx27Q3UHD6 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Snx27Q3UHD6 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Snx27Q3UHD6 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms