Protein–RNA interactions for Protein: Q3UHC2

Lrrk1, Leucine-rich repeat serine/threonine-protein kinase 1, mousemouse

Predictions only

Length 2,014 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrk1Q3UHC2 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lrrk1Q3UHC2 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lrrk1Q3UHC2 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Lrrk1Q3UHC2 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lrrk1Q3UHC2 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lrrk1Q3UHC2 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Lrrk1Q3UHC2 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lrrk1Q3UHC2 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
Lrrk1Q3UHC2 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Lrrk1Q3UHC2 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lrrk1Q3UHC2 Gm26971-201ENSMUST00000182423 1072 ntBASIC17.65■□□□□ 0.42
Lrrk1Q3UHC2 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Lrrk1Q3UHC2 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lrrk1Q3UHC2 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lrrk1Q3UHC2 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lrrk1Q3UHC2 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lrrk1Q3UHC2 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC17.64■□□□□ 0.42
Lrrk1Q3UHC2 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lrrk1Q3UHC2 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC17.64■□□□□ 0.41
Lrrk1Q3UHC2 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC17.64■□□□□ 0.41
Lrrk1Q3UHC2 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lrrk1Q3UHC2 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lrrk1Q3UHC2 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Lrrk1Q3UHC2 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lrrk1Q3UHC2 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lrrk1Q3UHC2 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lrrk1Q3UHC2 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Lrrk1Q3UHC2 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC17.64■□□□□ 0.41
Lrrk1Q3UHC2 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lrrk1Q3UHC2 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Lrrk1Q3UHC2 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lrrk1Q3UHC2 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Lrrk1Q3UHC2 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lrrk1Q3UHC2 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lrrk1Q3UHC2 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Lrrk1Q3UHC2 AC126028.2-201ENSMUST00000228100 1833 ntBASIC17.63■□□□□ 0.41
Lrrk1Q3UHC2 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Lrrk1Q3UHC2 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lrrk1Q3UHC2 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lrrk1Q3UHC2 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lrrk1Q3UHC2 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Lrrk1Q3UHC2 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Lrrk1Q3UHC2 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lrrk1Q3UHC2 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lrrk1Q3UHC2 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Lrrk1Q3UHC2 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lrrk1Q3UHC2 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lrrk1Q3UHC2 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lrrk1Q3UHC2 Gm10167-201ENSMUST00000150411 1479 ntBASIC17.62■□□□□ 0.41
Lrrk1Q3UHC2 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Lrrk1Q3UHC2 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lrrk1Q3UHC2 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lrrk1Q3UHC2 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lrrk1Q3UHC2 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Lrrk1Q3UHC2 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Lrrk1Q3UHC2 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lrrk1Q3UHC2 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lrrk1Q3UHC2 Gm43859-201ENSMUST00000200075 1412 ntBASIC17.61■□□□□ 0.41
Lrrk1Q3UHC2 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lrrk1Q3UHC2 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lrrk1Q3UHC2 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Lrrk1Q3UHC2 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Lrrk1Q3UHC2 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lrrk1Q3UHC2 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Lrrk1Q3UHC2 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lrrk1Q3UHC2 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lrrk1Q3UHC2 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lrrk1Q3UHC2 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lrrk1Q3UHC2 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lrrk1Q3UHC2 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lrrk1Q3UHC2 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Lrrk1Q3UHC2 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lrrk1Q3UHC2 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
Lrrk1Q3UHC2 Gm12441-201ENSMUST00000121806 588 ntBASIC17.6■□□□□ 0.41
Lrrk1Q3UHC2 Gm6211-202ENSMUST00000167849 925 ntBASIC17.6■□□□□ 0.41
Lrrk1Q3UHC2 Gm26524-201ENSMUST00000192339 390 ntBASIC17.6■□□□□ 0.41
Lrrk1Q3UHC2 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Lrrk1Q3UHC2 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Lrrk1Q3UHC2 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lrrk1Q3UHC2 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lrrk1Q3UHC2 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC17.6■□□□□ 0.41
Lrrk1Q3UHC2 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lrrk1Q3UHC2 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lrrk1Q3UHC2 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lrrk1Q3UHC2 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Lrrk1Q3UHC2 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lrrk1Q3UHC2 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lrrk1Q3UHC2 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Lrrk1Q3UHC2 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lrrk1Q3UHC2 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Lrrk1Q3UHC2 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Lrrk1Q3UHC2 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lrrk1Q3UHC2 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Lrrk1Q3UHC2 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Lrrk1Q3UHC2 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Lrrk1Q3UHC2 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Lrrk1Q3UHC2 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Lrrk1Q3UHC2 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.41
Lrrk1Q3UHC2 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC17.58■□□□□ 0.4
Lrrk1Q3UHC2 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms