Protein–RNA interactions for Protein: Q3UHC1

Rapgef1, Rap guanine nucleotide exchange factor (GEF) 1, mousemouse

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rapgef1Q3UHC1 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rapgef1Q3UHC1 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC20.68■□□□□ 0.9
Rapgef1Q3UHC1 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Rapgef1Q3UHC1 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rapgef1Q3UHC1 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Rapgef1Q3UHC1 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rapgef1Q3UHC1 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Rapgef1Q3UHC1 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Rapgef1Q3UHC1 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Rapgef1Q3UHC1 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rapgef1Q3UHC1 AC165080.2-201ENSMUST00000217491 1530 ntBASIC20.67■□□□□ 0.9
Rapgef1Q3UHC1 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rapgef1Q3UHC1 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rapgef1Q3UHC1 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rapgef1Q3UHC1 Golph3-205ENSMUST00000228671 2842 ntBASIC20.66■□□□□ 0.9
Rapgef1Q3UHC1 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
Rapgef1Q3UHC1 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Rapgef1Q3UHC1 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rapgef1Q3UHC1 Gm5297-201ENSMUST00000198555 1171 ntBASIC20.66■□□□□ 0.9
Rapgef1Q3UHC1 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Rapgef1Q3UHC1 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rapgef1Q3UHC1 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rapgef1Q3UHC1 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rapgef1Q3UHC1 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Rapgef1Q3UHC1 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rapgef1Q3UHC1 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rapgef1Q3UHC1 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rapgef1Q3UHC1 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Rapgef1Q3UHC1 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rapgef1Q3UHC1 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Rapgef1Q3UHC1 Gm37352-201ENSMUST00000193908 2181 ntBASIC20.65■□□□□ 0.9
Rapgef1Q3UHC1 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rapgef1Q3UHC1 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rapgef1Q3UHC1 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
Rapgef1Q3UHC1 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rapgef1Q3UHC1 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rapgef1Q3UHC1 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rapgef1Q3UHC1 Gm11421-201ENSMUST00000122124 294 ntBASIC20.65■□□□□ 0.9
Rapgef1Q3UHC1 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Rapgef1Q3UHC1 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rapgef1Q3UHC1 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC20.65■□□□□ 0.9
Rapgef1Q3UHC1 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Rapgef1Q3UHC1 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rapgef1Q3UHC1 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Rapgef1Q3UHC1 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rapgef1Q3UHC1 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Rapgef1Q3UHC1 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
Rapgef1Q3UHC1 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Rapgef1Q3UHC1 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC20.64■□□□□ 0.89
Rapgef1Q3UHC1 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Rapgef1Q3UHC1 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Rapgef1Q3UHC1 AC099934.2-201ENSMUST00000196389 70 ntBASIC20.64■□□□□ 0.89
Rapgef1Q3UHC1 AC156953.1-201ENSMUST00000196953 70 ntBASIC20.64■□□□□ 0.89
Rapgef1Q3UHC1 AC157822.2-201ENSMUST00000200291 70 ntBASIC20.64■□□□□ 0.89
Rapgef1Q3UHC1 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Rapgef1Q3UHC1 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rapgef1Q3UHC1 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rapgef1Q3UHC1 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Rapgef1Q3UHC1 Gm10129-202ENSMUST00000193100 1316 ntBASIC20.63■□□□□ 0.89
Rapgef1Q3UHC1 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rapgef1Q3UHC1 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC20.63■□□□□ 0.89
Rapgef1Q3UHC1 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC20.63■□□□□ 0.89
Rapgef1Q3UHC1 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rapgef1Q3UHC1 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rapgef1Q3UHC1 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rapgef1Q3UHC1 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rapgef1Q3UHC1 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rapgef1Q3UHC1 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rapgef1Q3UHC1 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Rapgef1Q3UHC1 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC20.62■□□□□ 0.89
Rapgef1Q3UHC1 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rapgef1Q3UHC1 AC164629.5-201ENSMUST00000220387 632 ntBASIC20.62■□□□□ 0.89
Rapgef1Q3UHC1 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Rapgef1Q3UHC1 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rapgef1Q3UHC1 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Rapgef1Q3UHC1 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rapgef1Q3UHC1 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rapgef1Q3UHC1 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rapgef1Q3UHC1 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC20.61■□□□□ 0.89
Rapgef1Q3UHC1 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rapgef1Q3UHC1 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC20.61■□□□□ 0.89
Rapgef1Q3UHC1 AC137127.1-201ENSMUST00000213466 1078 ntBASIC20.61■□□□□ 0.89
Rapgef1Q3UHC1 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC20.61■□□□□ 0.89
Rapgef1Q3UHC1 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC20.61■□□□□ 0.89
Rapgef1Q3UHC1 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rapgef1Q3UHC1 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rapgef1Q3UHC1 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rapgef1Q3UHC1 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rapgef1Q3UHC1 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rapgef1Q3UHC1 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rapgef1Q3UHC1 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Rapgef1Q3UHC1 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rapgef1Q3UHC1 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Rapgef1Q3UHC1 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC20.6■□□□□ 0.89
Rapgef1Q3UHC1 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rapgef1Q3UHC1 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC20.6■□□□□ 0.89
Rapgef1Q3UHC1 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rapgef1Q3UHC1 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rapgef1Q3UHC1 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Rapgef1Q3UHC1 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms