Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Cul4aQ3TCH7 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cul4aQ3TCH7 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cul4aQ3TCH7 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.78
Cul4aQ3TCH7 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
Cul4aQ3TCH7 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC19.94■□□□□ 0.78
Cul4aQ3TCH7 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC19.94■□□□□ 0.78
Cul4aQ3TCH7 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cul4aQ3TCH7 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Cul4aQ3TCH7 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cul4aQ3TCH7 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cul4aQ3TCH7 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cul4aQ3TCH7 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cul4aQ3TCH7 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Cul4aQ3TCH7 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cul4aQ3TCH7 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Cul4aQ3TCH7 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cul4aQ3TCH7 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Cul4aQ3TCH7 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cul4aQ3TCH7 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cul4aQ3TCH7 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cul4aQ3TCH7 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Cul4aQ3TCH7 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Cul4aQ3TCH7 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cul4aQ3TCH7 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC19.92■□□□□ 0.78
Cul4aQ3TCH7 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cul4aQ3TCH7 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cul4aQ3TCH7 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cul4aQ3TCH7 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Cul4aQ3TCH7 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cul4aQ3TCH7 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cul4aQ3TCH7 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Cul4aQ3TCH7 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cul4aQ3TCH7 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Cul4aQ3TCH7 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cul4aQ3TCH7 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC19.91■□□□□ 0.78
Cul4aQ3TCH7 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cul4aQ3TCH7 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Cul4aQ3TCH7 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cul4aQ3TCH7 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC19.91■□□□□ 0.78
Cul4aQ3TCH7 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cul4aQ3TCH7 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Cul4aQ3TCH7 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cul4aQ3TCH7 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Cul4aQ3TCH7 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cul4aQ3TCH7 Gm35558-201ENSMUST00000222675 2219 ntBASIC19.91■□□□□ 0.78
Cul4aQ3TCH7 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Cul4aQ3TCH7 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cul4aQ3TCH7 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC19.91■□□□□ 0.78
Cul4aQ3TCH7 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cul4aQ3TCH7 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC19.9■□□□□ 0.78
Cul4aQ3TCH7 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cul4aQ3TCH7 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Cul4aQ3TCH7 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Cul4aQ3TCH7 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Cul4aQ3TCH7 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cul4aQ3TCH7 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cul4aQ3TCH7 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cul4aQ3TCH7 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
Cul4aQ3TCH7 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cul4aQ3TCH7 Fam105a-203ENSMUST00000226170 3043 ntBASIC19.89■□□□□ 0.78
Cul4aQ3TCH7 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC19.89■□□□□ 0.77
Cul4aQ3TCH7 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cul4aQ3TCH7 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Cul4aQ3TCH7 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cul4aQ3TCH7 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Cul4aQ3TCH7 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC19.89■□□□□ 0.77
Cul4aQ3TCH7 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cul4aQ3TCH7 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cul4aQ3TCH7 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
Cul4aQ3TCH7 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cul4aQ3TCH7 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cul4aQ3TCH7 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cul4aQ3TCH7 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC19.88■□□□□ 0.77
Cul4aQ3TCH7 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC19.88■□□□□ 0.77
Cul4aQ3TCH7 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Cul4aQ3TCH7 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC19.88■□□□□ 0.77
Cul4aQ3TCH7 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cul4aQ3TCH7 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cul4aQ3TCH7 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cul4aQ3TCH7 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Cul4aQ3TCH7 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cul4aQ3TCH7 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cul4aQ3TCH7 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cul4aQ3TCH7 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cul4aQ3TCH7 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.77
Cul4aQ3TCH7 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cul4aQ3TCH7 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cul4aQ3TCH7 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cul4aQ3TCH7 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Cul4aQ3TCH7 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cul4aQ3TCH7 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cul4aQ3TCH7 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Cul4aQ3TCH7 Dmtn-210ENSMUST00000228824 2377 ntBASIC19.87■□□□□ 0.77
Cul4aQ3TCH7 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cul4aQ3TCH7 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cul4aQ3TCH7 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cul4aQ3TCH7 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cul4aQ3TCH7 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Cul4aQ3TCH7 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 10.2 ms