Protein–RNA interactions for Protein: Q3KNJ2

Nhej1, Non-homologous end-joining factor 1, mousemouse

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhej1Q3KNJ2 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC20.18■□□□□ 0.82
Nhej1Q3KNJ2 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nhej1Q3KNJ2 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC20.18■□□□□ 0.82
Nhej1Q3KNJ2 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nhej1Q3KNJ2 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nhej1Q3KNJ2 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nhej1Q3KNJ2 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Nhej1Q3KNJ2 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Nhej1Q3KNJ2 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nhej1Q3KNJ2 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nhej1Q3KNJ2 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nhej1Q3KNJ2 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Nhej1Q3KNJ2 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Nhej1Q3KNJ2 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Nhej1Q3KNJ2 Spcs1-204ENSMUST00000226782 949 ntBASIC20.17■□□□□ 0.82
Nhej1Q3KNJ2 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nhej1Q3KNJ2 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nhej1Q3KNJ2 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Nhej1Q3KNJ2 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nhej1Q3KNJ2 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nhej1Q3KNJ2 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Nhej1Q3KNJ2 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Nhej1Q3KNJ2 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nhej1Q3KNJ2 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nhej1Q3KNJ2 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC20.16■□□□□ 0.82
Nhej1Q3KNJ2 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nhej1Q3KNJ2 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nhej1Q3KNJ2 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nhej1Q3KNJ2 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nhej1Q3KNJ2 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nhej1Q3KNJ2 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Nhej1Q3KNJ2 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Nhej1Q3KNJ2 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Nhej1Q3KNJ2 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Nhej1Q3KNJ2 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Nhej1Q3KNJ2 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC20.16■□□□□ 0.82
Nhej1Q3KNJ2 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nhej1Q3KNJ2 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC20.16■□□□□ 0.82
Nhej1Q3KNJ2 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nhej1Q3KNJ2 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Nhej1Q3KNJ2 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Nhej1Q3KNJ2 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC20.16■□□□□ 0.82
Nhej1Q3KNJ2 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nhej1Q3KNJ2 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Nhej1Q3KNJ2 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nhej1Q3KNJ2 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Nhej1Q3KNJ2 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Nhej1Q3KNJ2 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nhej1Q3KNJ2 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Nhej1Q3KNJ2 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Nhej1Q3KNJ2 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nhej1Q3KNJ2 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nhej1Q3KNJ2 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Nhej1Q3KNJ2 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Nhej1Q3KNJ2 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Nhej1Q3KNJ2 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Nhej1Q3KNJ2 Gm7160-202ENSMUST00000188519 1027 ntBASIC20.14■□□□□ 0.81
Nhej1Q3KNJ2 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Nhej1Q3KNJ2 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Nhej1Q3KNJ2 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Nhej1Q3KNJ2 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Nhej1Q3KNJ2 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Nhej1Q3KNJ2 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Nhej1Q3KNJ2 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Nhej1Q3KNJ2 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Nhej1Q3KNJ2 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Nhej1Q3KNJ2 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nhej1Q3KNJ2 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
Nhej1Q3KNJ2 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC20.13■□□□□ 0.81
Nhej1Q3KNJ2 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nhej1Q3KNJ2 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC20.13■□□□□ 0.81
Nhej1Q3KNJ2 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC20.13■□□□□ 0.81
Nhej1Q3KNJ2 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Nhej1Q3KNJ2 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nhej1Q3KNJ2 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Nhej1Q3KNJ2 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nhej1Q3KNJ2 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nhej1Q3KNJ2 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Nhej1Q3KNJ2 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nhej1Q3KNJ2 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nhej1Q3KNJ2 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nhej1Q3KNJ2 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nhej1Q3KNJ2 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Nhej1Q3KNJ2 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nhej1Q3KNJ2 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Nhej1Q3KNJ2 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC20.11■□□□□ 0.81
Nhej1Q3KNJ2 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Nhej1Q3KNJ2 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Nhej1Q3KNJ2 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Nhej1Q3KNJ2 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Nhej1Q3KNJ2 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Nhej1Q3KNJ2 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Nhej1Q3KNJ2 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Nhej1Q3KNJ2 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Nhej1Q3KNJ2 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC20.11■□□□□ 0.81
Nhej1Q3KNJ2 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC20.11■□□□□ 0.81
Nhej1Q3KNJ2 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC20.11■□□□□ 0.81
Nhej1Q3KNJ2 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Nhej1Q3KNJ2 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC20.11■□□□□ 0.81
Nhej1Q3KNJ2 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms