Protein–RNA interactions for Protein: Q07643

Col9a2, Collagen alpha-2(IX) chain, mousemouse

Predictions only

Length 688 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a2Q07643 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Col9a2Q07643 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Col9a2Q07643 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC20.73■□□□□ 0.91
Col9a2Q07643 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Col9a2Q07643 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Col9a2Q07643 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Col9a2Q07643 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Col9a2Q07643 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Col9a2Q07643 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
Col9a2Q07643 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Col9a2Q07643 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC20.72■□□□□ 0.91
Col9a2Q07643 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC20.72■□□□□ 0.91
Col9a2Q07643 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Col9a2Q07643 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC20.72■□□□□ 0.91
Col9a2Q07643 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Col9a2Q07643 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Col9a2Q07643 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Col9a2Q07643 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Col9a2Q07643 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Col9a2Q07643 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Col9a2Q07643 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Col9a2Q07643 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Col9a2Q07643 Gm43545-201ENSMUST00000196765 2779 ntBASIC20.71■□□□□ 0.91
Col9a2Q07643 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Col9a2Q07643 Gm37563-201ENSMUST00000192580 1513 ntBASIC20.7■□□□□ 0.9
Col9a2Q07643 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Col9a2Q07643 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Col9a2Q07643 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Col9a2Q07643 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Col9a2Q07643 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Col9a2Q07643 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Col9a2Q07643 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.7■□□□□ 0.9
Col9a2Q07643 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Col9a2Q07643 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Col9a2Q07643 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Col9a2Q07643 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Col9a2Q07643 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Col9a2Q07643 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Col9a2Q07643 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Col9a2Q07643 Gm10167-201ENSMUST00000150411 1479 ntBASIC20.69■□□□□ 0.9
Col9a2Q07643 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Col9a2Q07643 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Col9a2Q07643 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Col9a2Q07643 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC20.68■□□□□ 0.9
Col9a2Q07643 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Col9a2Q07643 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Col9a2Q07643 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Col9a2Q07643 Gm5408-201ENSMUST00000197998 747 ntBASIC20.68■□□□□ 0.9
Col9a2Q07643 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
Col9a2Q07643 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Col9a2Q07643 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Col9a2Q07643 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
Col9a2Q07643 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Col9a2Q07643 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Col9a2Q07643 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Col9a2Q07643 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Col9a2Q07643 Gm7290-201ENSMUST00000104990 617 ntBASIC20.67■□□□□ 0.9
Col9a2Q07643 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC20.67■□□□□ 0.9
Col9a2Q07643 Gm12918-201ENSMUST00000120234 636 ntBASIC20.67■□□□□ 0.9
Col9a2Q07643 Gm15710-201ENSMUST00000121821 636 ntBASIC20.67■□□□□ 0.9
Col9a2Q07643 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC20.67■□□□□ 0.9
Col9a2Q07643 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Col9a2Q07643 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC20.67■□□□□ 0.9
Col9a2Q07643 Gm5075-201ENSMUST00000196916 622 ntBASIC20.67■□□□□ 0.9
Col9a2Q07643 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC20.67■□□□□ 0.9
Col9a2Q07643 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC20.67■□□□□ 0.9
Col9a2Q07643 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Col9a2Q07643 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Col9a2Q07643 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Col9a2Q07643 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Col9a2Q07643 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC20.67■□□□□ 0.9
Col9a2Q07643 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Col9a2Q07643 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Col9a2Q07643 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Col9a2Q07643 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Col9a2Q07643 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC20.66■□□□□ 0.9
Col9a2Q07643 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Col9a2Q07643 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Col9a2Q07643 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Col9a2Q07643 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Col9a2Q07643 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
Col9a2Q07643 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Col9a2Q07643 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Col9a2Q07643 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
Col9a2Q07643 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Col9a2Q07643 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Col9a2Q07643 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Col9a2Q07643 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC20.65■□□□□ 0.9
Col9a2Q07643 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC20.65■□□□□ 0.9
Col9a2Q07643 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Col9a2Q07643 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Col9a2Q07643 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Col9a2Q07643 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Col9a2Q07643 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Col9a2Q07643 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.9
Col9a2Q07643 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
Col9a2Q07643 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Col9a2Q07643 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Col9a2Q07643 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Col9a2Q07643 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms