Protein–RNA interactions for Protein: P97471

Smad4, Mothers against decapentaplegic homolog 4, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smad4P97471 AC140264.2-202ENSMUST00000218746 817 ntBASIC19.14■□□□□ 0.65
Smad4P97471 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Smad4P97471 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Smad4P97471 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Smad4P97471 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Smad4P97471 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Smad4P97471 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC19.14■□□□□ 0.65
Smad4P97471 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC19.13■□□□□ 0.65
Smad4P97471 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC19.13■□□□□ 0.65
Smad4P97471 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Smad4P97471 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Smad4P97471 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smad4P97471 Gm21814-202ENSMUST00000203277 873 ntBASIC19.13■□□□□ 0.65
Smad4P97471 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC19.13■□□□□ 0.65
Smad4P97471 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smad4P97471 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Smad4P97471 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smad4P97471 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Smad4P97471 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Smad4P97471 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Smad4P97471 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Smad4P97471 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Smad4P97471 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC19.12■□□□□ 0.65
Smad4P97471 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Smad4P97471 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC19.12■□□□□ 0.65
Smad4P97471 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Smad4P97471 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Smad4P97471 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Smad4P97471 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Smad4P97471 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Smad4P97471 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Smad4P97471 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Smad4P97471 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Smad4P97471 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC19.11■□□□□ 0.65
Smad4P97471 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Smad4P97471 Arhgef4-208ENSMUST00000211073 171 ntBASIC19.11■□□□□ 0.65
Smad4P97471 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.11■□□□□ 0.65
Smad4P97471 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Smad4P97471 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.11■□□□□ 0.65
Smad4P97471 Flg-201ENSMUST00000050758 1488 ntBASIC19.1■□□□□ 0.65
Smad4P97471 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Smad4P97471 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Smad4P97471 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Smad4P97471 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
Smad4P97471 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Smad4P97471 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Smad4P97471 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Smad4P97471 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Smad4P97471 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC19.1■□□□□ 0.65
Smad4P97471 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Smad4P97471 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Smad4P97471 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC19.1■□□□□ 0.65
Smad4P97471 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Smad4P97471 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Smad4P97471 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Smad4P97471 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Smad4P97471 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Smad4P97471 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Smad4P97471 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Smad4P97471 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
Smad4P97471 Gm13559-201ENSMUST00000120476 863 ntBASIC19.09■□□□□ 0.65
Smad4P97471 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Smad4P97471 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Smad4P97471 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC19.09■□□□□ 0.65
Smad4P97471 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Smad4P97471 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Smad4P97471 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Smad4P97471 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Smad4P97471 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Smad4P97471 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Smad4P97471 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Smad4P97471 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
Smad4P97471 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Smad4P97471 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Smad4P97471 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Smad4P97471 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Smad4P97471 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Smad4P97471 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Smad4P97471 Gm10517-202ENSMUST00000192970 758 ntBASIC19.08■□□□□ 0.64
Smad4P97471 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Smad4P97471 Wnt10b-205ENSMUST00000226846 1204 ntBASIC19.08■□□□□ 0.64
Smad4P97471 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Smad4P97471 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Smad4P97471 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Smad4P97471 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Smad4P97471 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Smad4P97471 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Smad4P97471 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Smad4P97471 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Smad4P97471 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Smad4P97471 Gm11927-201ENSMUST00000118472 759 ntBASIC19.07■□□□□ 0.64
Smad4P97471 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC19.07■□□□□ 0.64
Smad4P97471 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Smad4P97471 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Smad4P97471 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Smad4P97471 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Smad4P97471 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Smad4P97471 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC19.06■□□□□ 0.64
Smad4P97471 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Smad4P97471 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms