Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim43cP86449 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC20.7■□□□□ 0.9
Trim43cP86449 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim43cP86449 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim43cP86449 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC20.7■□□□□ 0.9
Trim43cP86449 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Trim43cP86449 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim43cP86449 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC20.7■□□□□ 0.9
Trim43cP86449 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Trim43cP86449 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim43cP86449 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim43cP86449 Reep4-203ENSMUST00000226563 1444 ntBASIC20.7■□□□□ 0.9
Trim43cP86449 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim43cP86449 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim43cP86449 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim43cP86449 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim43cP86449 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim43cP86449 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
Trim43cP86449 Gm27032-201ENSMUST00000183124 1116 ntBASIC20.69■□□□□ 0.9
Trim43cP86449 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Trim43cP86449 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC20.69■□□□□ 0.9
Trim43cP86449 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim43cP86449 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Trim43cP86449 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Trim43cP86449 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim43cP86449 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim43cP86449 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim43cP86449 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC20.68■□□□□ 0.9
Trim43cP86449 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Trim43cP86449 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim43cP86449 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC20.68■□□□□ 0.9
Trim43cP86449 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC20.68■□□□□ 0.9
Trim43cP86449 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC20.68■□□□□ 0.9
Trim43cP86449 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim43cP86449 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim43cP86449 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim43cP86449 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC20.67■□□□□ 0.9
Trim43cP86449 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim43cP86449 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim43cP86449 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC20.67■□□□□ 0.9
Trim43cP86449 Gm10493-201ENSMUST00000097270 612 ntBASIC20.67■□□□□ 0.9
Trim43cP86449 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim43cP86449 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC20.67■□□□□ 0.9
Trim43cP86449 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim43cP86449 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Trim43cP86449 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim43cP86449 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim43cP86449 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim43cP86449 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.66■□□□□ 0.9
Trim43cP86449 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.66■□□□□ 0.9
Trim43cP86449 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
Trim43cP86449 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC20.66■□□□□ 0.9
Trim43cP86449 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim43cP86449 Rncr4-201ENSMUST00000194541 2234 ntBASIC20.66■□□□□ 0.9
Trim43cP86449 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Trim43cP86449 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Trim43cP86449 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim43cP86449 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Trim43cP86449 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim43cP86449 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim43cP86449 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim43cP86449 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim43cP86449 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim43cP86449 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Trim43cP86449 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim43cP86449 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim43cP86449 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim43cP86449 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Trim43cP86449 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
Trim43cP86449 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Trim43cP86449 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Trim43cP86449 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trim43cP86449 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC20.64■□□□□ 0.89
Trim43cP86449 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Trim43cP86449 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Trim43cP86449 Golph3-205ENSMUST00000228671 2842 ntBASIC20.64■□□□□ 0.89
Trim43cP86449 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim43cP86449 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC20.63■□□□□ 0.89
Trim43cP86449 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim43cP86449 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim43cP86449 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Trim43cP86449 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC20.63■□□□□ 0.89
Trim43cP86449 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Trim43cP86449 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Trim43cP86449 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Trim43cP86449 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim43cP86449 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim43cP86449 Gm43231-201ENSMUST00000202960 2258 ntBASIC20.62■□□□□ 0.89
Trim43cP86449 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Trim43cP86449 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC20.62■□□□□ 0.89
Trim43cP86449 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim43cP86449 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim43cP86449 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Trim43cP86449 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim43cP86449 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
Trim43cP86449 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC20.62■□□□□ 0.89
Trim43cP86449 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim43cP86449 Gm9885-202ENSMUST00000186234 2209 ntBASIC20.62■□□□□ 0.89
Trim43cP86449 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim43cP86449 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms