Protein–RNA interactions for Protein: P70441

Slc9a3r1, Na(+)/H(+) exchange regulatory cofactor NHE-RF1, mousemouse

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc9a3r1P70441 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Slc9a3r1P70441 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC18.13■□□□□ 0.49
Slc9a3r1P70441 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Slc9a3r1P70441 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Slc9a3r1P70441 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Slc9a3r1P70441 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
Slc9a3r1P70441 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.12■□□□□ 0.49
Slc9a3r1P70441 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Slc9a3r1P70441 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC18.12■□□□□ 0.49
Slc9a3r1P70441 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC18.12■□□□□ 0.49
Slc9a3r1P70441 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC18.12■□□□□ 0.49
Slc9a3r1P70441 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Slc9a3r1P70441 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Slc9a3r1P70441 Gm6365-201ENSMUST00000054711 744 ntBASIC18.12■□□□□ 0.49
Slc9a3r1P70441 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
Slc9a3r1P70441 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Slc9a3r1P70441 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
Slc9a3r1P70441 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Slc9a3r1P70441 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC18.12■□□□□ 0.49
Slc9a3r1P70441 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Slc9a3r1P70441 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Slc9a3r1P70441 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Slc9a3r1P70441 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Slc9a3r1P70441 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Slc9a3r1P70441 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Slc9a3r1P70441 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC18.11■□□□□ 0.49
Slc9a3r1P70441 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Slc9a3r1P70441 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Slc9a3r1P70441 Gm10655-201ENSMUST00000098658 1397 ntBASIC18.11■□□□□ 0.49
Slc9a3r1P70441 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Slc9a3r1P70441 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Slc9a3r1P70441 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Slc9a3r1P70441 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Slc9a3r1P70441 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.11■□□□□ 0.49
Slc9a3r1P70441 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Slc9a3r1P70441 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Slc9a3r1P70441 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Slc9a3r1P70441 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Slc9a3r1P70441 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Slc9a3r1P70441 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Slc9a3r1P70441 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Slc9a3r1P70441 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Slc9a3r1P70441 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Slc9a3r1P70441 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Slc9a3r1P70441 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Slc9a3r1P70441 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Slc9a3r1P70441 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Slc9a3r1P70441 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Slc9a3r1P70441 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Slc9a3r1P70441 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Slc9a3r1P70441 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC18.09■□□□□ 0.49
Slc9a3r1P70441 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Slc9a3r1P70441 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Slc9a3r1P70441 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Slc9a3r1P70441 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Slc9a3r1P70441 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Slc9a3r1P70441 Gm12669-201ENSMUST00000122162 1009 ntBASIC18.09■□□□□ 0.49
Slc9a3r1P70441 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC18.09■□□□□ 0.49
Slc9a3r1P70441 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Slc9a3r1P70441 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Slc9a3r1P70441 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Slc9a3r1P70441 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Slc9a3r1P70441 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Slc9a3r1P70441 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Slc9a3r1P70441 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Slc9a3r1P70441 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Slc9a3r1P70441 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
Slc9a3r1P70441 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Slc9a3r1P70441 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Slc9a3r1P70441 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Slc9a3r1P70441 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Slc9a3r1P70441 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC18.08■□□□□ 0.48
Slc9a3r1P70441 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Slc9a3r1P70441 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Slc9a3r1P70441 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Slc9a3r1P70441 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC18.08■□□□□ 0.48
Slc9a3r1P70441 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Slc9a3r1P70441 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Slc9a3r1P70441 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Slc9a3r1P70441 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Slc9a3r1P70441 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Slc9a3r1P70441 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC18.07■□□□□ 0.48
Slc9a3r1P70441 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
Slc9a3r1P70441 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Slc9a3r1P70441 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Slc9a3r1P70441 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC18.07■□□□□ 0.48
Slc9a3r1P70441 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Slc9a3r1P70441 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC18.07■□□□□ 0.48
Slc9a3r1P70441 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Slc9a3r1P70441 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Slc9a3r1P70441 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Slc9a3r1P70441 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC18.06■□□□□ 0.48
Slc9a3r1P70441 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Slc9a3r1P70441 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Slc9a3r1P70441 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Slc9a3r1P70441 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Slc9a3r1P70441 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Slc9a3r1P70441 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Slc9a3r1P70441 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Slc9a3r1P70441 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms