Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Crnkl1P63154 Cdkn3-203ENSMUST00000227149 1952 ntBASIC18.72■□□□□ 0.59
Crnkl1P63154 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Crnkl1P63154 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Crnkl1P63154 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Crnkl1P63154 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Crnkl1P63154 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Crnkl1P63154 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Crnkl1P63154 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Crnkl1P63154 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Crnkl1P63154 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Crnkl1P63154 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Crnkl1P63154 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Crnkl1P63154 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Crnkl1P63154 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Crnkl1P63154 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Crnkl1P63154 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Crnkl1P63154 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Crnkl1P63154 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Crnkl1P63154 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Crnkl1P63154 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Crnkl1P63154 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Crnkl1P63154 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Crnkl1P63154 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC18.71■□□□□ 0.59
Crnkl1P63154 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Crnkl1P63154 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Crnkl1P63154 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Crnkl1P63154 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Crnkl1P63154 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Crnkl1P63154 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Crnkl1P63154 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Crnkl1P63154 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Crnkl1P63154 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Crnkl1P63154 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Crnkl1P63154 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Crnkl1P63154 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Crnkl1P63154 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Crnkl1P63154 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Crnkl1P63154 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC18.7■□□□□ 0.58
Crnkl1P63154 Gm37811-201ENSMUST00000192416 2601 ntBASIC18.7■□□□□ 0.58
Crnkl1P63154 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC18.7■□□□□ 0.58
Crnkl1P63154 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Crnkl1P63154 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Crnkl1P63154 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Crnkl1P63154 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Crnkl1P63154 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Crnkl1P63154 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Crnkl1P63154 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
Crnkl1P63154 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
Crnkl1P63154 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Crnkl1P63154 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Crnkl1P63154 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.69■□□□□ 0.58
Crnkl1P63154 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Crnkl1P63154 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC18.69■□□□□ 0.58
Crnkl1P63154 Gm22238-201ENSMUST00000175222 88 ntBASIC18.69■□□□□ 0.58
Crnkl1P63154 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Crnkl1P63154 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Crnkl1P63154 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Crnkl1P63154 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Crnkl1P63154 Dmtn-210ENSMUST00000228824 2377 ntBASIC18.69■□□□□ 0.58
Crnkl1P63154 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Crnkl1P63154 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Crnkl1P63154 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC18.69■□□□□ 0.58
Crnkl1P63154 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Crnkl1P63154 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Crnkl1P63154 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Crnkl1P63154 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Crnkl1P63154 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Crnkl1P63154 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Crnkl1P63154 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Crnkl1P63154 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Crnkl1P63154 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC18.68■□□□□ 0.58
Crnkl1P63154 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Crnkl1P63154 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Crnkl1P63154 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Crnkl1P63154 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Crnkl1P63154 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Crnkl1P63154 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Crnkl1P63154 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Crnkl1P63154 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Crnkl1P63154 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Crnkl1P63154 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Crnkl1P63154 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Crnkl1P63154 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Crnkl1P63154 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Crnkl1P63154 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Crnkl1P63154 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Crnkl1P63154 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Crnkl1P63154 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Crnkl1P63154 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Crnkl1P63154 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC18.67■□□□□ 0.58
Crnkl1P63154 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.67■□□□□ 0.58
Crnkl1P63154 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Crnkl1P63154 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Crnkl1P63154 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Crnkl1P63154 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC18.67■□□□□ 0.58
Crnkl1P63154 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Crnkl1P63154 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC18.66■□□□□ 0.58
Crnkl1P63154 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC18.66■□□□□ 0.58
Crnkl1P63154 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms