Protein–RNA interactions for Protein: P61079

Ube2d3, Ubiquitin-conjugating enzyme E2 D3, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube2d3P61079 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ube2d3P61079 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ube2d3P61079 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ube2d3P61079 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ube2d3P61079 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ube2d3P61079 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ube2d3P61079 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Ube2d3P61079 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Ube2d3P61079 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ube2d3P61079 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC13.52□□□□□ -0.24
Ube2d3P61079 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.24
Ube2d3P61079 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Ube2d3P61079 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Ube2d3P61079 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ube2d3P61079 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ube2d3P61079 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ube2d3P61079 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ube2d3P61079 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ube2d3P61079 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ube2d3P61079 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ube2d3P61079 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ube2d3P61079 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ube2d3P61079 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ube2d3P61079 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ube2d3P61079 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC13.52□□□□□ -0.25
Ube2d3P61079 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ube2d3P61079 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ube2d3P61079 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ube2d3P61079 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Ube2d3P61079 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ube2d3P61079 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ube2d3P61079 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ube2d3P61079 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ube2d3P61079 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ube2d3P61079 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ube2d3P61079 Ddx41-204ENSMUST00000224765 2199 ntBASIC13.51□□□□□ -0.25
Ube2d3P61079 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Ube2d3P61079 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ube2d3P61079 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ube2d3P61079 Gm42911-201ENSMUST00000199360 1630 ntBASIC13.51□□□□□ -0.25
Ube2d3P61079 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ube2d3P61079 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ube2d3P61079 Serp2-204ENSMUST00000228055 705 ntBASIC13.51□□□□□ -0.25
Ube2d3P61079 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ube2d3P61079 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC13.51□□□□□ -0.25
Ube2d3P61079 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC13.51□□□□□ -0.25
Ube2d3P61079 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ube2d3P61079 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ube2d3P61079 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Ube2d3P61079 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC13.51□□□□□ -0.25
Ube2d3P61079 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC13.51□□□□□ -0.25
Ube2d3P61079 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Ube2d3P61079 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Ube2d3P61079 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ube2d3P61079 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ube2d3P61079 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ube2d3P61079 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ube2d3P61079 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ube2d3P61079 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
Ube2d3P61079 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ube2d3P61079 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ube2d3P61079 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ube2d3P61079 AC124603.1-201ENSMUST00000223843 308 ntBASIC13.5□□□□□ -0.25
Ube2d3P61079 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ube2d3P61079 AC126028.2-201ENSMUST00000228100 1833 ntBASIC13.5□□□□□ -0.25
Ube2d3P61079 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ube2d3P61079 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Ube2d3P61079 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ube2d3P61079 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Ube2d3P61079 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC13.49□□□□□ -0.25
Ube2d3P61079 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ube2d3P61079 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ube2d3P61079 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ube2d3P61079 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ube2d3P61079 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC13.49□□□□□ -0.25
Ube2d3P61079 Gm43548-201ENSMUST00000197139 2353 ntBASIC13.49□□□□□ -0.25
Ube2d3P61079 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ube2d3P61079 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ube2d3P61079 Gm5576-201ENSMUST00000075809 1236 ntBASIC13.49□□□□□ -0.25
Ube2d3P61079 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Ube2d3P61079 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ube2d3P61079 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC13.49□□□□□ -0.25
Ube2d3P61079 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ube2d3P61079 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ube2d3P61079 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ube2d3P61079 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ube2d3P61079 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC13.48□□□□□ -0.25
Ube2d3P61079 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ube2d3P61079 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ube2d3P61079 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ube2d3P61079 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ube2d3P61079 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ube2d3P61079 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ube2d3P61079 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC13.48□□□□□ -0.25
Ube2d3P61079 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ube2d3P61079 Gm9847-201ENSMUST00000052528 599 ntBASIC13.48□□□□□ -0.25
Ube2d3P61079 Gm10571-201ENSMUST00000097869 1638 ntBASIC13.48□□□□□ -0.25
Ube2d3P61079 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Ube2d3P61079 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ube2d3P61079 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms