Protein–RNA interactions for Protein: P56563

Lim2, Lens fiber membrane intrinsic protein, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lim2P56563 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.98■□□□□ 0.63
Lim2P56563 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18.98■□□□□ 0.63
Lim2P56563 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Lim2P56563 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Lim2P56563 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Lim2P56563 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC18.98■□□□□ 0.63
Lim2P56563 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Lim2P56563 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Lim2P56563 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Lim2P56563 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Lim2P56563 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Lim2P56563 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Lim2P56563 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Lim2P56563 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Lim2P56563 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Lim2P56563 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Lim2P56563 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC18.97■□□□□ 0.63
Lim2P56563 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Lim2P56563 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Lim2P56563 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Lim2P56563 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC18.97■□□□□ 0.63
Lim2P56563 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Lim2P56563 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Lim2P56563 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Lim2P56563 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Lim2P56563 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Lim2P56563 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Lim2P56563 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Lim2P56563 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC18.96■□□□□ 0.63
Lim2P56563 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Lim2P56563 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.96■□□□□ 0.63
Lim2P56563 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Lim2P56563 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Lim2P56563 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Lim2P56563 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Lim2P56563 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Lim2P56563 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC18.96■□□□□ 0.63
Lim2P56563 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC18.96■□□□□ 0.63
Lim2P56563 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Lim2P56563 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Lim2P56563 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Lim2P56563 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Lim2P56563 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Lim2P56563 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Lim2P56563 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Lim2P56563 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Lim2P56563 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Lim2P56563 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Lim2P56563 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Lim2P56563 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Lim2P56563 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Lim2P56563 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC18.95■□□□□ 0.62
Lim2P56563 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Lim2P56563 Gm42569-201ENSMUST00000200539 472 ntBASIC18.95■□□□□ 0.62
Lim2P56563 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Lim2P56563 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Lim2P56563 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
Lim2P56563 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Lim2P56563 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.95■□□□□ 0.62
Lim2P56563 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC18.95■□□□□ 0.62
Lim2P56563 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Lim2P56563 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Lim2P56563 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Lim2P56563 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Lim2P56563 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC18.94■□□□□ 0.62
Lim2P56563 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.94■□□□□ 0.62
Lim2P56563 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Lim2P56563 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Lim2P56563 Gm38205-201ENSMUST00000192243 258 ntBASIC18.94■□□□□ 0.62
Lim2P56563 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Lim2P56563 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Lim2P56563 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Lim2P56563 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC18.94■□□□□ 0.62
Lim2P56563 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Lim2P56563 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Lim2P56563 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
Lim2P56563 Gm10849-201ENSMUST00000100397 618 ntBASIC18.93■□□□□ 0.62
Lim2P56563 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC18.93■□□□□ 0.62
Lim2P56563 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC18.93■□□□□ 0.62
Lim2P56563 AV356131-201ENSMUST00000206201 750 ntBASIC18.93■□□□□ 0.62
Lim2P56563 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Lim2P56563 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC18.93■□□□□ 0.62
Lim2P56563 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Lim2P56563 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Lim2P56563 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Lim2P56563 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Lim2P56563 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Lim2P56563 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Lim2P56563 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Lim2P56563 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Lim2P56563 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Lim2P56563 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Lim2P56563 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lim2P56563 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC18.92■□□□□ 0.62
Lim2P56563 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lim2P56563 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lim2P56563 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC18.92■□□□□ 0.62
Lim2P56563 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lim2P56563 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lim2P56563 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms