Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
NcanP55066 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NcanP55066 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
NcanP55066 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
NcanP55066 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
NcanP55066 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NcanP55066 Gm43672-201ENSMUST00000199072 1731 ntBASIC20.25■□□□□ 0.83
NcanP55066 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NcanP55066 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NcanP55066 Gm6659-201ENSMUST00000174752 547 ntBASIC20.25■□□□□ 0.83
NcanP55066 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NcanP55066 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NcanP55066 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NcanP55066 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
NcanP55066 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
NcanP55066 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC20.24■□□□□ 0.83
NcanP55066 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC20.24■□□□□ 0.83
NcanP55066 AC175538.1-201ENSMUST00000225343 1269 ntBASIC20.24■□□□□ 0.83
NcanP55066 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NcanP55066 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
NcanP55066 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NcanP55066 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NcanP55066 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NcanP55066 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
NcanP55066 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC20.23■□□□□ 0.83
NcanP55066 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NcanP55066 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
NcanP55066 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NcanP55066 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC20.23■□□□□ 0.83
NcanP55066 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NcanP55066 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
NcanP55066 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NcanP55066 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NcanP55066 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
NcanP55066 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
NcanP55066 AC159205.3-201ENSMUST00000224614 874 ntBASIC20.22■□□□□ 0.83
NcanP55066 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NcanP55066 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NcanP55066 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NcanP55066 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
NcanP55066 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC20.22■□□□□ 0.83
NcanP55066 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NcanP55066 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
NcanP55066 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
NcanP55066 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
NcanP55066 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
NcanP55066 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NcanP55066 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC20.21■□□□□ 0.83
NcanP55066 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NcanP55066 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
NcanP55066 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
NcanP55066 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NcanP55066 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NcanP55066 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NcanP55066 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
NcanP55066 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
NcanP55066 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
NcanP55066 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NcanP55066 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
NcanP55066 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
NcanP55066 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
NcanP55066 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NcanP55066 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.19■□□□□ 0.82
NcanP55066 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NcanP55066 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
NcanP55066 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
NcanP55066 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NcanP55066 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
NcanP55066 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NcanP55066 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
NcanP55066 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NcanP55066 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
NcanP55066 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NcanP55066 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
NcanP55066 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC20.18■□□□□ 0.82
NcanP55066 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NcanP55066 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NcanP55066 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NcanP55066 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC20.18■□□□□ 0.82
NcanP55066 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NcanP55066 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
NcanP55066 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NcanP55066 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NcanP55066 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
NcanP55066 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NcanP55066 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NcanP55066 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NcanP55066 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
NcanP55066 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC20.17■□□□□ 0.82
NcanP55066 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
NcanP55066 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
NcanP55066 Alkbh1-212ENSMUST00000185301 408 ntBASIC20.17■□□□□ 0.82
NcanP55066 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NcanP55066 Gm26766-202ENSMUST00000227544 2347 ntBASIC20.17■□□□□ 0.82
NcanP55066 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
NcanP55066 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NcanP55066 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
NcanP55066 Gm9103-201ENSMUST00000119371 405 ntBASIC20.16■□□□□ 0.82
NcanP55066 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC20.16■□□□□ 0.82
NcanP55066 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC20.16■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms