Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Nub1P54729 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nub1P54729 Gm38205-201ENSMUST00000192243 258 ntBASIC20.37■□□□□ 0.85
Nub1P54729 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nub1P54729 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Nub1P54729 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nub1P54729 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC20.36■□□□□ 0.85
Nub1P54729 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Nub1P54729 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Nub1P54729 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC20.36■□□□□ 0.85
Nub1P54729 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nub1P54729 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nub1P54729 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Nub1P54729 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC20.36■□□□□ 0.85
Nub1P54729 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nub1P54729 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC20.36■□□□□ 0.85
Nub1P54729 Gm18284-201ENSMUST00000172604 624 ntBASIC20.36■□□□□ 0.85
Nub1P54729 AC099934.2-201ENSMUST00000196389 70 ntBASIC20.36■□□□□ 0.85
Nub1P54729 AC156953.1-201ENSMUST00000196953 70 ntBASIC20.36■□□□□ 0.85
Nub1P54729 AC157822.2-201ENSMUST00000200291 70 ntBASIC20.36■□□□□ 0.85
Nub1P54729 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nub1P54729 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nub1P54729 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Nub1P54729 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Nub1P54729 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nub1P54729 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Nub1P54729 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC20.35■□□□□ 0.85
Nub1P54729 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC20.35■□□□□ 0.85
Nub1P54729 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nub1P54729 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nub1P54729 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Nub1P54729 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC20.35■□□□□ 0.85
Nub1P54729 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nub1P54729 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nub1P54729 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nub1P54729 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nub1P54729 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC20.35■□□□□ 0.85
Nub1P54729 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nub1P54729 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nub1P54729 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nub1P54729 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nub1P54729 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Nub1P54729 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Nub1P54729 Gm5874-201ENSMUST00000096101 508 ntBASIC20.34■□□□□ 0.85
Nub1P54729 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nub1P54729 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nub1P54729 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Nub1P54729 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Nub1P54729 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Nub1P54729 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC20.33■□□□□ 0.85
Nub1P54729 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Nub1P54729 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Nub1P54729 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Nub1P54729 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC20.33■□□□□ 0.84
Nub1P54729 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Nub1P54729 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
Nub1P54729 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nub1P54729 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nub1P54729 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nub1P54729 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Nub1P54729 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nub1P54729 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Nub1P54729 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nub1P54729 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nub1P54729 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nub1P54729 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC20.31■□□□□ 0.84
Nub1P54729 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Nub1P54729 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nub1P54729 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nub1P54729 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nub1P54729 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nub1P54729 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Nub1P54729 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nub1P54729 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nub1P54729 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nub1P54729 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Nub1P54729 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nub1P54729 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nub1P54729 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Nub1P54729 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Nub1P54729 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nub1P54729 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Nub1P54729 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nub1P54729 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Nub1P54729 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC20.3■□□□□ 0.84
Nub1P54729 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nub1P54729 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nub1P54729 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nub1P54729 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Nub1P54729 Gm13234-201ENSMUST00000120010 747 ntBASIC20.29■□□□□ 0.84
Nub1P54729 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nub1P54729 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nub1P54729 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nub1P54729 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Nub1P54729 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Nub1P54729 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nub1P54729 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nub1P54729 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nub1P54729 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC20.28■□□□□ 0.84
Nub1P54729 CT010467.1-202ENSMUST00000205406 714 ntBASIC20.28■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms