Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Sox1P53783 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Sox1P53783 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC19.51■□□□□ 0.71
Sox1P53783 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
Sox1P53783 AC133598.3-202ENSMUST00000224219 531 ntBASIC19.51■□□□□ 0.71
Sox1P53783 Gm5867-201ENSMUST00000063197 592 ntBASIC19.51■□□□□ 0.71
Sox1P53783 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Sox1P53783 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sox1P53783 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Sox1P53783 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sox1P53783 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Sox1P53783 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC19.5■□□□□ 0.71
Sox1P53783 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sox1P53783 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC19.5■□□□□ 0.71
Sox1P53783 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Sox1P53783 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Sox1P53783 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sox1P53783 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Sox1P53783 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC19.5■□□□□ 0.71
Sox1P53783 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Sox1P53783 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sox1P53783 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sox1P53783 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC19.5■□□□□ 0.71
Sox1P53783 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC19.5■□□□□ 0.71
Sox1P53783 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sox1P53783 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sox1P53783 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sox1P53783 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sox1P53783 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sox1P53783 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC19.49■□□□□ 0.71
Sox1P53783 Gm7860-201ENSMUST00000121190 879 ntBASIC19.49■□□□□ 0.71
Sox1P53783 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Sox1P53783 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
Sox1P53783 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sox1P53783 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sox1P53783 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Sox1P53783 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Sox1P53783 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Sox1P53783 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sox1P53783 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Sox1P53783 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Sox1P53783 Gm10013-201ENSMUST00000106074 672 ntBASIC19.48■□□□□ 0.71
Sox1P53783 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sox1P53783 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC19.48■□□□□ 0.71
Sox1P53783 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Sox1P53783 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sox1P53783 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sox1P53783 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sox1P53783 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Sox1P53783 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Sox1P53783 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sox1P53783 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sox1P53783 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Sox1P53783 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC19.48■□□□□ 0.71
Sox1P53783 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Sox1P53783 Gm5913-201ENSMUST00000119397 1399 ntBASIC19.47■□□□□ 0.71
Sox1P53783 Gm17971-201ENSMUST00000190239 806 ntBASIC19.47■□□□□ 0.71
Sox1P53783 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sox1P53783 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Sox1P53783 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Sox1P53783 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Sox1P53783 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sox1P53783 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Sox1P53783 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Sox1P53783 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC19.46■□□□□ 0.71
Sox1P53783 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sox1P53783 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Sox1P53783 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sox1P53783 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sox1P53783 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sox1P53783 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Sox1P53783 AA414768-201ENSMUST00000121924 1257 ntBASIC19.46■□□□□ 0.71
Sox1P53783 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Sox1P53783 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Sox1P53783 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sox1P53783 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sox1P53783 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC19.46■□□□□ 0.71
Sox1P53783 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sox1P53783 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sox1P53783 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sox1P53783 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sox1P53783 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
Sox1P53783 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Sox1P53783 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sox1P53783 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC19.45■□□□□ 0.7
Sox1P53783 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Sox1P53783 AC130713.1-201ENSMUST00000228853 1096 ntBASIC19.45■□□□□ 0.7
Sox1P53783 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sox1P53783 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sox1P53783 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Sox1P53783 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sox1P53783 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Sox1P53783 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sox1P53783 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sox1P53783 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Sox1P53783 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sox1P53783 Gm44771-201ENSMUST00000206975 626 ntBASIC19.44■□□□□ 0.7
Sox1P53783 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Sox1P53783 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Sox1P53783 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms