Protein–RNA interactions for Protein: P52955

Lbx1, Transcription factor LBX1, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lbx1P52955 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Lbx1P52955 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Lbx1P52955 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Lbx1P52955 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Lbx1P52955 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Lbx1P52955 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Lbx1P52955 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Lbx1P52955 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
Lbx1P52955 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Lbx1P52955 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC18.41■□□□□ 0.54
Lbx1P52955 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Lbx1P52955 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
Lbx1P52955 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Lbx1P52955 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
Lbx1P52955 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Lbx1P52955 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lbx1P52955 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Lbx1P52955 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lbx1P52955 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lbx1P52955 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lbx1P52955 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
Lbx1P52955 Gm7153-201ENSMUST00000117092 455 ntBASIC18.4■□□□□ 0.54
Lbx1P52955 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lbx1P52955 AC159205.6-201ENSMUST00000224935 887 ntBASIC18.4■□□□□ 0.54
Lbx1P52955 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lbx1P52955 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lbx1P52955 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Lbx1P52955 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lbx1P52955 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Lbx1P52955 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lbx1P52955 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Lbx1P52955 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lbx1P52955 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC18.39■□□□□ 0.53
Lbx1P52955 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lbx1P52955 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Lbx1P52955 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Lbx1P52955 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC18.39■□□□□ 0.53
Lbx1P52955 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
Lbx1P52955 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lbx1P52955 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lbx1P52955 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
Lbx1P52955 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC18.38■□□□□ 0.53
Lbx1P52955 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lbx1P52955 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Lbx1P52955 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC18.38■□□□□ 0.53
Lbx1P52955 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lbx1P52955 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lbx1P52955 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lbx1P52955 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Lbx1P52955 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lbx1P52955 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lbx1P52955 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Lbx1P52955 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lbx1P52955 Gm18959-201ENSMUST00000208954 655 ntBASIC18.37■□□□□ 0.53
Lbx1P52955 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC18.37■□□□□ 0.53
Lbx1P52955 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Lbx1P52955 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC18.37■□□□□ 0.53
Lbx1P52955 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Lbx1P52955 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lbx1P52955 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lbx1P52955 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lbx1P52955 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lbx1P52955 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Lbx1P52955 Gm12382-201ENSMUST00000122005 922 ntBASIC18.36■□□□□ 0.53
Lbx1P52955 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Lbx1P52955 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC18.36■□□□□ 0.53
Lbx1P52955 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Lbx1P52955 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Lbx1P52955 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC18.36■□□□□ 0.53
Lbx1P52955 AC156016.1-201ENSMUST00000227190 1035 ntBASIC18.36■□□□□ 0.53
Lbx1P52955 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Lbx1P52955 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Lbx1P52955 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Lbx1P52955 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Lbx1P52955 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Lbx1P52955 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Lbx1P52955 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Lbx1P52955 Notumos-201ENSMUST00000151998 2659 ntBASIC18.36■□□□□ 0.53
Lbx1P52955 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lbx1P52955 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Lbx1P52955 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lbx1P52955 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Lbx1P52955 Mzt1-203ENSMUST00000227948 952 ntBASIC18.35■□□□□ 0.53
Lbx1P52955 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lbx1P52955 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lbx1P52955 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
Lbx1P52955 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lbx1P52955 Gm42418-201ENSMUST00000182010 1831 ntBASIC18.35■□□□□ 0.53
Lbx1P52955 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
Lbx1P52955 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lbx1P52955 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lbx1P52955 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Lbx1P52955 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lbx1P52955 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lbx1P52955 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lbx1P52955 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lbx1P52955 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Lbx1P52955 Gm16042-201ENSMUST00000204813 1247 ntBASIC18.34■□□□□ 0.53
Lbx1P52955 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lbx1P52955 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms