Protein–RNA interactions for Protein: P52019

Sqle, Squalene monooxygenase, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SqleP52019 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SqleP52019 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC20.71■□□□□ 0.91
SqleP52019 Gm8668-201ENSMUST00000120559 1447 ntBASIC20.71■□□□□ 0.91
SqleP52019 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
SqleP52019 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SqleP52019 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SqleP52019 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
SqleP52019 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SqleP52019 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SqleP52019 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SqleP52019 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
SqleP52019 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SqleP52019 Dmtn-209ENSMUST00000228295 2572 ntBASIC20.7■□□□□ 0.9
SqleP52019 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SqleP52019 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC20.7■□□□□ 0.9
SqleP52019 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SqleP52019 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SqleP52019 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SqleP52019 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC20.7■□□□□ 0.9
SqleP52019 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SqleP52019 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SqleP52019 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SqleP52019 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SqleP52019 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SqleP52019 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SqleP52019 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SqleP52019 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC20.69■□□□□ 0.9
SqleP52019 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SqleP52019 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SqleP52019 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
SqleP52019 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SqleP52019 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SqleP52019 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SqleP52019 Gm26766-202ENSMUST00000227544 2347 ntBASIC20.69■□□□□ 0.9
SqleP52019 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SqleP52019 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC20.68■□□□□ 0.9
SqleP52019 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SqleP52019 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
SqleP52019 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SqleP52019 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SqleP52019 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.68■□□□□ 0.9
SqleP52019 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
SqleP52019 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
SqleP52019 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SqleP52019 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SqleP52019 Gm6659-201ENSMUST00000174752 547 ntBASIC20.67■□□□□ 0.9
SqleP52019 Gm6728-201ENSMUST00000178117 1065 ntBASIC20.67■□□□□ 0.9
SqleP52019 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
SqleP52019 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SqleP52019 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SqleP52019 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SqleP52019 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SqleP52019 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC20.67■□□□□ 0.9
SqleP52019 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SqleP52019 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SqleP52019 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SqleP52019 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
SqleP52019 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.66■□□□□ 0.9
SqleP52019 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SqleP52019 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
SqleP52019 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
SqleP52019 AC175538.1-201ENSMUST00000225343 1269 ntBASIC20.66■□□□□ 0.9
SqleP52019 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SqleP52019 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
SqleP52019 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SqleP52019 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SqleP52019 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
SqleP52019 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SqleP52019 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.65■□□□□ 0.9
SqleP52019 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SqleP52019 Gm30025-201ENSMUST00000218555 728 ntBASIC20.65■□□□□ 0.9
SqleP52019 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SqleP52019 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
SqleP52019 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SqleP52019 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SqleP52019 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
SqleP52019 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
SqleP52019 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SqleP52019 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SqleP52019 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SqleP52019 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
SqleP52019 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SqleP52019 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SqleP52019 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SqleP52019 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SqleP52019 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SqleP52019 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SqleP52019 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SqleP52019 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC20.63■□□□□ 0.89
SqleP52019 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SqleP52019 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SqleP52019 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SqleP52019 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
SqleP52019 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SqleP52019 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SqleP52019 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SqleP52019 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SqleP52019 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SqleP52019 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SqleP52019 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms