Protein–RNA interactions for Protein: P51954

Nek1, Serine/threonine-protein kinase Nek1, mousemouse

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nek1P51954 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Nek1P51954 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC21.12■□□□□ 0.97
Nek1P51954 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Nek1P51954 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Nek1P51954 Gm12251-201ENSMUST00000117893 792 ntBASIC21.12■□□□□ 0.97
Nek1P51954 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Nek1P51954 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Nek1P51954 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Nek1P51954 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Nek1P51954 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
Nek1P51954 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Nek1P51954 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Nek1P51954 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Nek1P51954 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Nek1P51954 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Nek1P51954 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Nek1P51954 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Nek1P51954 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Nek1P51954 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Nek1P51954 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
Nek1P51954 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Nek1P51954 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Nek1P51954 Gm7160-202ENSMUST00000188519 1027 ntBASIC21.11■□□□□ 0.97
Nek1P51954 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC21.11■□□□□ 0.97
Nek1P51954 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Nek1P51954 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC21.11■□□□□ 0.97
Nek1P51954 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC21.11■□□□□ 0.97
Nek1P51954 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Nek1P51954 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Nek1P51954 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Nek1P51954 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Nek1P51954 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Nek1P51954 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Nek1P51954 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Nek1P51954 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Nek1P51954 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC21.1■□□□□ 0.97
Nek1P51954 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC21.1■□□□□ 0.97
Nek1P51954 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Nek1P51954 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC21.1■□□□□ 0.97
Nek1P51954 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Nek1P51954 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Nek1P51954 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Nek1P51954 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Nek1P51954 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Nek1P51954 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Nek1P51954 Cdc34b-202ENSMUST00000188741 1252 ntBASIC21.09■□□□□ 0.97
Nek1P51954 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Nek1P51954 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Nek1P51954 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Nek1P51954 Spcs1-207ENSMUST00000228767 1008 ntBASIC21.09■□□□□ 0.97
Nek1P51954 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Nek1P51954 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Nek1P51954 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Nek1P51954 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Nek1P51954 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Nek1P51954 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC21.08■□□□□ 0.97
Nek1P51954 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Nek1P51954 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Nek1P51954 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Nek1P51954 Gm26833-201ENSMUST00000180899 440 ntBASIC21.08■□□□□ 0.97
Nek1P51954 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Nek1P51954 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC21.08■□□□□ 0.97
Nek1P51954 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Nek1P51954 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Nek1P51954 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Nek1P51954 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Nek1P51954 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Nek1P51954 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
Nek1P51954 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Nek1P51954 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Nek1P51954 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Nek1P51954 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Nek1P51954 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Nek1P51954 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Nek1P51954 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC21.07■□□□□ 0.96
Nek1P51954 Spcs1-204ENSMUST00000226782 949 ntBASIC21.07■□□□□ 0.96
Nek1P51954 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Nek1P51954 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Nek1P51954 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Nek1P51954 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Nek1P51954 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Nek1P51954 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Nek1P51954 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Nek1P51954 Gm7291-201ENSMUST00000199147 382 ntBASIC21.06■□□□□ 0.96
Nek1P51954 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC21.06■□□□□ 0.96
Nek1P51954 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Nek1P51954 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Nek1P51954 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC21.05■□□□□ 0.96
Nek1P51954 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Nek1P51954 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Nek1P51954 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC21.05■□□□□ 0.96
Nek1P51954 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Nek1P51954 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Nek1P51954 Gm42569-201ENSMUST00000200539 472 ntBASIC21.05■□□□□ 0.96
Nek1P51954 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Nek1P51954 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Nek1P51954 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Nek1P51954 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Nek1P51954 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Nek1P51954 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms