Protein–RNA interactions for Protein: P48379

Rfx2, DNA-binding protein RFX2, mousemouse

Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx2P48379 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rfx2P48379 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Rfx2P48379 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.85■□□□□ 0.77
Rfx2P48379 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rfx2P48379 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rfx2P48379 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Rfx2P48379 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rfx2P48379 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rfx2P48379 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rfx2P48379 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rfx2P48379 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC19.84■□□□□ 0.77
Rfx2P48379 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rfx2P48379 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rfx2P48379 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rfx2P48379 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Rfx2P48379 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rfx2P48379 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Rfx2P48379 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Rfx2P48379 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rfx2P48379 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Rfx2P48379 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
Rfx2P48379 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Rfx2P48379 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Rfx2P48379 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.82■□□□□ 0.76
Rfx2P48379 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rfx2P48379 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rfx2P48379 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rfx2P48379 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rfx2P48379 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Rfx2P48379 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Rfx2P48379 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.82■□□□□ 0.76
Rfx2P48379 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Rfx2P48379 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rfx2P48379 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rfx2P48379 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rfx2P48379 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rfx2P48379 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rfx2P48379 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rfx2P48379 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rfx2P48379 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rfx2P48379 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.81■□□□□ 0.76
Rfx2P48379 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC19.81■□□□□ 0.76
Rfx2P48379 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Rfx2P48379 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rfx2P48379 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rfx2P48379 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rfx2P48379 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Rfx2P48379 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rfx2P48379 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rfx2P48379 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rfx2P48379 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Rfx2P48379 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rfx2P48379 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC19.8■□□□□ 0.76
Rfx2P48379 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
Rfx2P48379 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC19.8■□□□□ 0.76
Rfx2P48379 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Rfx2P48379 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC19.8■□□□□ 0.76
Rfx2P48379 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC19.8■□□□□ 0.76
Rfx2P48379 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC19.8■□□□□ 0.76
Rfx2P48379 CT025689.6-201ENSMUST00000224991 1104 ntBASIC19.8■□□□□ 0.76
Rfx2P48379 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
Rfx2P48379 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC19.8■□□□□ 0.76
Rfx2P48379 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rfx2P48379 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rfx2P48379 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC19.79■□□□□ 0.76
Rfx2P48379 CT030146.1-201ENSMUST00000220919 217 ntBASIC19.79■□□□□ 0.76
Rfx2P48379 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC19.79■□□□□ 0.76
Rfx2P48379 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Rfx2P48379 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Rfx2P48379 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rfx2P48379 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Rfx2P48379 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC19.79■□□□□ 0.76
Rfx2P48379 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Rfx2P48379 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Rfx2P48379 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.78■□□□□ 0.76
Rfx2P48379 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Rfx2P48379 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rfx2P48379 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Rfx2P48379 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Rfx2P48379 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Rfx2P48379 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rfx2P48379 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Rfx2P48379 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Rfx2P48379 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Rfx2P48379 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rfx2P48379 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rfx2P48379 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rfx2P48379 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rfx2P48379 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Rfx2P48379 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rfx2P48379 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rfx2P48379 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Rfx2P48379 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Rfx2P48379 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Rfx2P48379 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rfx2P48379 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rfx2P48379 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rfx2P48379 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Rfx2P48379 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Rfx2P48379 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC19.76■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms