Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 BC021767-201ENSMUST00000126387 1716 ntBASIC19.2■□□□□ 0.66
Vps4bP46467 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Vps4bP46467 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Vps4bP46467 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Vps4bP46467 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Vps4bP46467 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
Vps4bP46467 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Vps4bP46467 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Vps4bP46467 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Vps4bP46467 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Vps4bP46467 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Vps4bP46467 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Vps4bP46467 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Vps4bP46467 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Vps4bP46467 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Vps4bP46467 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Vps4bP46467 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Vps4bP46467 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC19.19■□□□□ 0.66
Vps4bP46467 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Vps4bP46467 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Vps4bP46467 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Vps4bP46467 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Vps4bP46467 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Vps4bP46467 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Vps4bP46467 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Vps4bP46467 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
Vps4bP46467 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Vps4bP46467 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Vps4bP46467 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Vps4bP46467 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC19.18■□□□□ 0.66
Vps4bP46467 Gm12251-201ENSMUST00000117893 792 ntBASIC19.18■□□□□ 0.66
Vps4bP46467 AC137127.1-201ENSMUST00000213466 1078 ntBASIC19.18■□□□□ 0.66
Vps4bP46467 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Vps4bP46467 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Vps4bP46467 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC19.18■□□□□ 0.66
Vps4bP46467 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Vps4bP46467 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Vps4bP46467 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Vps4bP46467 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Vps4bP46467 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Vps4bP46467 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Vps4bP46467 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Vps4bP46467 AC165080.2-201ENSMUST00000217491 1530 ntBASIC19.17■□□□□ 0.66
Vps4bP46467 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC19.17■□□□□ 0.66
Vps4bP46467 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC19.17■□□□□ 0.66
Vps4bP46467 Gm8495-201ENSMUST00000188740 694 ntBASIC19.17■□□□□ 0.66
Vps4bP46467 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Vps4bP46467 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Vps4bP46467 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Vps4bP46467 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Vps4bP46467 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Vps4bP46467 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Vps4bP46467 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Vps4bP46467 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Vps4bP46467 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Vps4bP46467 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.16■□□□□ 0.66
Vps4bP46467 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Vps4bP46467 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Vps4bP46467 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Vps4bP46467 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC19.16■□□□□ 0.66
Vps4bP46467 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Vps4bP46467 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Vps4bP46467 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Vps4bP46467 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Vps4bP46467 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Vps4bP46467 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Vps4bP46467 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Vps4bP46467 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
Vps4bP46467 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Vps4bP46467 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Vps4bP46467 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC19.16■□□□□ 0.66
Vps4bP46467 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Vps4bP46467 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Vps4bP46467 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Vps4bP46467 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Vps4bP46467 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Vps4bP46467 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Vps4bP46467 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Vps4bP46467 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Vps4bP46467 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
Vps4bP46467 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Vps4bP46467 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC19.15■□□□□ 0.66
Vps4bP46467 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
Vps4bP46467 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC19.15■□□□□ 0.66
Vps4bP46467 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Vps4bP46467 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC19.15■□□□□ 0.66
Vps4bP46467 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Vps4bP46467 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Vps4bP46467 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Vps4bP46467 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Vps4bP46467 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Vps4bP46467 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Vps4bP46467 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Vps4bP46467 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Vps4bP46467 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Vps4bP46467 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Vps4bP46467 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Vps4bP46467 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Vps4bP46467 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Vps4bP46467 Mir7075-201ENSMUST00000184187 82 ntBASIC19.14■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms