Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Sox18P43680 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sox18P43680 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC18.17■□□□□ 0.5
Sox18P43680 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC18.17■□□□□ 0.5
Sox18P43680 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC18.17■□□□□ 0.5
Sox18P43680 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC18.17■□□□□ 0.5
Sox18P43680 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sox18P43680 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Sox18P43680 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Sox18P43680 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Sox18P43680 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sox18P43680 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Sox18P43680 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sox18P43680 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sox18P43680 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sox18P43680 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sox18P43680 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sox18P43680 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Sox18P43680 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Sox18P43680 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sox18P43680 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Sox18P43680 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC18.16■□□□□ 0.5
Sox18P43680 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sox18P43680 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sox18P43680 Gm42911-201ENSMUST00000199360 1630 ntBASIC18.16■□□□□ 0.5
Sox18P43680 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC18.16■□□□□ 0.5
Sox18P43680 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sox18P43680 Dio3-201ENSMUST00000097228 1449 ntBASIC18.15■□□□□ 0.5
Sox18P43680 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sox18P43680 AC131586.2-201ENSMUST00000228370 1512 ntBASIC18.15■□□□□ 0.5
Sox18P43680 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Sox18P43680 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sox18P43680 Gm18666-201ENSMUST00000190039 958 ntBASIC18.15■□□□□ 0.5
Sox18P43680 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sox18P43680 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Sox18P43680 Gm13509-201ENSMUST00000119733 1308 ntBASIC18.15■□□□□ 0.5
Sox18P43680 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sox18P43680 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Sox18P43680 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
Sox18P43680 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC18.14■□□□□ 0.5
Sox18P43680 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sox18P43680 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sox18P43680 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Sox18P43680 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Sox18P43680 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
Sox18P43680 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sox18P43680 Gm10698-201ENSMUST00000182663 604 ntBASIC18.14■□□□□ 0.49
Sox18P43680 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC18.14■□□□□ 0.49
Sox18P43680 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Sox18P43680 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sox18P43680 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sox18P43680 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Sox18P43680 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Sox18P43680 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.13■□□□□ 0.49
Sox18P43680 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
Sox18P43680 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Sox18P43680 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC18.13■□□□□ 0.49
Sox18P43680 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC18.13■□□□□ 0.49
Sox18P43680 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sox18P43680 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Sox18P43680 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Sox18P43680 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sox18P43680 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Sox18P43680 AC153881.2-201ENSMUST00000214877 204 ntBASIC18.13■□□□□ 0.49
Sox18P43680 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sox18P43680 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sox18P43680 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Sox18P43680 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sox18P43680 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC18.13■□□□□ 0.49
Sox18P43680 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sox18P43680 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sox18P43680 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Sox18P43680 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Sox18P43680 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sox18P43680 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Sox18P43680 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sox18P43680 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sox18P43680 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC18.12■□□□□ 0.49
Sox18P43680 Mir1199-201ENSMUST00000117015 119 ntBASIC18.12■□□□□ 0.49
Sox18P43680 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sox18P43680 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Sox18P43680 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sox18P43680 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Sox18P43680 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sox18P43680 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sox18P43680 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sox18P43680 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC18.12■□□□□ 0.49
Sox18P43680 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sox18P43680 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Sox18P43680 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Sox18P43680 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sox18P43680 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sox18P43680 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
Sox18P43680 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sox18P43680 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Sox18P43680 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sox18P43680 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sox18P43680 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sox18P43680 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC18.11■□□□□ 0.49
Sox18P43680 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms