Protein–RNA interactions for Protein: P43407

Sdc2, Syndecan-2, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc2P43407 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Sdc2P43407 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC21.25■□□□□ 0.99
Sdc2P43407 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC21.25■□□□□ 0.99
Sdc2P43407 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Sdc2P43407 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Sdc2P43407 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC21.25■□□□□ 0.99
Sdc2P43407 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Sdc2P43407 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Sdc2P43407 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Sdc2P43407 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sdc2P43407 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sdc2P43407 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Sdc2P43407 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC21.24■□□□□ 0.99
Sdc2P43407 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sdc2P43407 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sdc2P43407 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Sdc2P43407 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Sdc2P43407 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sdc2P43407 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Sdc2P43407 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC21.24■□□□□ 0.99
Sdc2P43407 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sdc2P43407 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Sdc2P43407 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Sdc2P43407 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Sdc2P43407 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Sdc2P43407 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC21.23■□□□□ 0.99
Sdc2P43407 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Sdc2P43407 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Sdc2P43407 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Sdc2P43407 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Sdc2P43407 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Sdc2P43407 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Sdc2P43407 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Sdc2P43407 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Sdc2P43407 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Sdc2P43407 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Sdc2P43407 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
Sdc2P43407 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Sdc2P43407 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Sdc2P43407 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Sdc2P43407 Mir7075-201ENSMUST00000184187 82 ntBASIC21.22■□□□□ 0.99
Sdc2P43407 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Sdc2P43407 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Sdc2P43407 Gm5540-201ENSMUST00000131852 1848 ntBASIC21.22■□□□□ 0.99
Sdc2P43407 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Sdc2P43407 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Sdc2P43407 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Sdc2P43407 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Sdc2P43407 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Sdc2P43407 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Sdc2P43407 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Sdc2P43407 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Sdc2P43407 Gm6627-201ENSMUST00000218299 2386 ntBASIC21.21■□□□□ 0.99
Sdc2P43407 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Sdc2P43407 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC21.21■□□□□ 0.99
Sdc2P43407 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC21.21■□□□□ 0.99
Sdc2P43407 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Sdc2P43407 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Sdc2P43407 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Sdc2P43407 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC21.21■□□□□ 0.99
Sdc2P43407 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC21.21■□□□□ 0.99
Sdc2P43407 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Sdc2P43407 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.99
Sdc2P43407 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC21.2■□□□□ 0.99
Sdc2P43407 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Sdc2P43407 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC21.2■□□□□ 0.98
Sdc2P43407 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC21.2■□□□□ 0.98
Sdc2P43407 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Sdc2P43407 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Sdc2P43407 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC21.2■□□□□ 0.98
Sdc2P43407 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Sdc2P43407 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Sdc2P43407 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sdc2P43407 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sdc2P43407 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sdc2P43407 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Sdc2P43407 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
Sdc2P43407 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sdc2P43407 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sdc2P43407 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC21.19■□□□□ 0.98
Sdc2P43407 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC21.19■□□□□ 0.98
Sdc2P43407 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sdc2P43407 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sdc2P43407 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Sdc2P43407 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sdc2P43407 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sdc2P43407 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sdc2P43407 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sdc2P43407 Gm9885-202ENSMUST00000186234 2209 ntBASIC21.19■□□□□ 0.98
Sdc2P43407 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sdc2P43407 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sdc2P43407 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sdc2P43407 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sdc2P43407 Smad6-203ENSMUST00000179458 273 ntBASIC21.18■□□□□ 0.98
Sdc2P43407 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC21.18■□□□□ 0.98
Sdc2P43407 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sdc2P43407 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sdc2P43407 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Sdc2P43407 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Sdc2P43407 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms