Protein–RNA interactions for Protein: P43247

Msh2, DNA mismatch repair protein Msh2, mousemouse

Known RBP Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh2P43247 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC19.51■□□□□ 0.71
Msh2P43247 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Msh2P43247 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Msh2P43247 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Msh2P43247 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Msh2P43247 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Msh2P43247 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Msh2P43247 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Msh2P43247 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC19.5■□□□□ 0.71
Msh2P43247 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
Msh2P43247 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Msh2P43247 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Msh2P43247 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Msh2P43247 Gm12251-201ENSMUST00000117893 792 ntBASIC19.5■□□□□ 0.71
Msh2P43247 Gm7160-202ENSMUST00000188519 1027 ntBASIC19.5■□□□□ 0.71
Msh2P43247 Spcs1-204ENSMUST00000226782 949 ntBASIC19.5■□□□□ 0.71
Msh2P43247 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Msh2P43247 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Msh2P43247 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Msh2P43247 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Msh2P43247 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Msh2P43247 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Msh2P43247 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Msh2P43247 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Msh2P43247 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Msh2P43247 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Msh2P43247 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Msh2P43247 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Msh2P43247 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Msh2P43247 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Msh2P43247 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Msh2P43247 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Msh2P43247 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Msh2P43247 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Msh2P43247 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Msh2P43247 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC19.48■□□□□ 0.71
Msh2P43247 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Msh2P43247 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC19.48■□□□□ 0.71
Msh2P43247 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Msh2P43247 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Msh2P43247 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Msh2P43247 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
Msh2P43247 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Msh2P43247 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Msh2P43247 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Msh2P43247 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
Msh2P43247 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC19.48■□□□□ 0.71
Msh2P43247 Gm6139-201ENSMUST00000079261 882 ntBASIC19.48■□□□□ 0.71
Msh2P43247 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Msh2P43247 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Msh2P43247 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Msh2P43247 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Msh2P43247 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Msh2P43247 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Msh2P43247 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC19.47■□□□□ 0.71
Msh2P43247 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Msh2P43247 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Msh2P43247 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC19.47■□□□□ 0.71
Msh2P43247 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Msh2P43247 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Msh2P43247 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Msh2P43247 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Msh2P43247 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.47■□□□□ 0.71
Msh2P43247 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Msh2P43247 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Msh2P43247 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC19.47■□□□□ 0.71
Msh2P43247 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Msh2P43247 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.47■□□□□ 0.71
Msh2P43247 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Msh2P43247 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Msh2P43247 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Msh2P43247 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Msh2P43247 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Msh2P43247 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Msh2P43247 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Msh2P43247 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Msh2P43247 Gm8493-201ENSMUST00000196881 489 ntBASIC19.46■□□□□ 0.71
Msh2P43247 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Msh2P43247 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Msh2P43247 Gm45606-201ENSMUST00000209836 2795 ntBASIC19.46■□□□□ 0.71
Msh2P43247 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Msh2P43247 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Msh2P43247 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Msh2P43247 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Msh2P43247 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Msh2P43247 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Msh2P43247 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Msh2P43247 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Msh2P43247 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Msh2P43247 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Msh2P43247 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Msh2P43247 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Msh2P43247 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Msh2P43247 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Msh2P43247 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC19.45■□□□□ 0.7
Msh2P43247 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Msh2P43247 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC19.45■□□□□ 0.7
Msh2P43247 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC19.45■□□□□ 0.7
Msh2P43247 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC19.45■□□□□ 0.7
Msh2P43247 Wdr70-203ENSMUST00000227371 1130 ntBASIC19.45■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms