Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HttP42859 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HttP42859 Gm23634-201ENSMUST00000175071 91 ntBASIC20.64■□□□□ 0.89
HttP42859 Arhgef4-208ENSMUST00000211073 171 ntBASIC20.64■□□□□ 0.89
HttP42859 Gm16042-201ENSMUST00000204813 1247 ntBASIC20.63■□□□□ 0.89
HttP42859 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HttP42859 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
HttP42859 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
HttP42859 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HttP42859 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
HttP42859 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
HttP42859 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HttP42859 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
HttP42859 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HttP42859 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HttP42859 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HttP42859 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
HttP42859 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HttP42859 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HttP42859 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
HttP42859 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
HttP42859 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HttP42859 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
HttP42859 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
HttP42859 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
HttP42859 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
HttP42859 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HttP42859 Gm27032-201ENSMUST00000183124 1116 ntBASIC20.62■□□□□ 0.89
HttP42859 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
HttP42859 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HttP42859 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
HttP42859 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
HttP42859 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.61■□□□□ 0.89
HttP42859 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HttP42859 Gm13158-201ENSMUST00000122007 736 ntBASIC20.61■□□□□ 0.89
HttP42859 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HttP42859 Gm30025-201ENSMUST00000218555 728 ntBASIC20.6■□□□□ 0.89
HttP42859 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HttP42859 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HttP42859 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HttP42859 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
HttP42859 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HttP42859 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HttP42859 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
HttP42859 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
HttP42859 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
HttP42859 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
HttP42859 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HttP42859 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
HttP42859 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
HttP42859 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
HttP42859 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
HttP42859 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC20.58■□□□□ 0.89
HttP42859 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
HttP42859 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
HttP42859 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
HttP42859 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
HttP42859 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
HttP42859 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
HttP42859 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
HttP42859 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
HttP42859 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HttP42859 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HttP42859 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
HttP42859 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HttP42859 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HttP42859 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
HttP42859 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HttP42859 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HttP42859 AC140264.2-202ENSMUST00000218746 817 ntBASIC20.56■□□□□ 0.88
HttP42859 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
HttP42859 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
HttP42859 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HttP42859 AA386476-201ENSMUST00000098781 1665 ntBASIC20.56■□□□□ 0.88
HttP42859 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HttP42859 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
HttP42859 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HttP42859 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
HttP42859 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
HttP42859 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HttP42859 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
HttP42859 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HttP42859 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HttP42859 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HttP42859 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HttP42859 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
HttP42859 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
HttP42859 Gm9103-201ENSMUST00000119371 405 ntBASIC20.55■□□□□ 0.88
HttP42859 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HttP42859 Wnt10b-205ENSMUST00000226846 1204 ntBASIC20.55■□□□□ 0.88
HttP42859 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.55■□□□□ 0.88
HttP42859 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
HttP42859 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HttP42859 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
HttP42859 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HttP42859 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HttP42859 Gm10013-201ENSMUST00000106074 672 ntBASIC20.54■□□□□ 0.88
HttP42859 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
HttP42859 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HttP42859 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms