Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Abca1P41233 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Abca1P41233 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Abca1P41233 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC15.67■□□□□ 0.1
Abca1P41233 Trmt13-210ENSMUST00000198454 880 ntBASIC15.67■□□□□ 0.1
Abca1P41233 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Abca1P41233 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Abca1P41233 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Abca1P41233 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Abca1P41233 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Abca1P41233 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Abca1P41233 Mir6982-201ENSMUST00000184354 68 ntBASIC15.66■□□□□ 0.1
Abca1P41233 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC15.66■□□□□ 0.1
Abca1P41233 AC135963.1-201ENSMUST00000211640 717 ntBASIC15.66■□□□□ 0.1
Abca1P41233 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Abca1P41233 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Abca1P41233 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Abca1P41233 Iqck-206ENSMUST00000208658 2891 ntBASIC15.66■□□□□ 0.1
Abca1P41233 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC15.66■□□□□ 0.1
Abca1P41233 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Abca1P41233 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Abca1P41233 AC122769.4-201ENSMUST00000228166 901 ntBASIC15.66■□□□□ 0.1
Abca1P41233 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Abca1P41233 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Abca1P41233 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Abca1P41233 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Abca1P41233 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Abca1P41233 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Abca1P41233 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Abca1P41233 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Abca1P41233 Gm38205-201ENSMUST00000192243 258 ntBASIC15.65■□□□□ 0.1
Abca1P41233 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Abca1P41233 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Abca1P41233 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Abca1P41233 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Abca1P41233 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Abca1P41233 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Abca1P41233 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Abca1P41233 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Abca1P41233 Gm29241-201ENSMUST00000189260 1096 ntBASIC15.65■□□□□ 0.1
Abca1P41233 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC15.65■□□□□ 0.1
Abca1P41233 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Abca1P41233 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Abca1P41233 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Abca1P41233 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Abca1P41233 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Abca1P41233 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Abca1P41233 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Abca1P41233 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC15.64■□□□□ 0.09
Abca1P41233 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Abca1P41233 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Abca1P41233 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC15.64■□□□□ 0.09
Abca1P41233 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Abca1P41233 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Abca1P41233 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC15.64■□□□□ 0.09
Abca1P41233 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
Abca1P41233 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Abca1P41233 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Abca1P41233 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Abca1P41233 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Abca1P41233 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Abca1P41233 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Abca1P41233 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Abca1P41233 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
Abca1P41233 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Abca1P41233 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Abca1P41233 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Abca1P41233 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Abca1P41233 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Abca1P41233 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Abca1P41233 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Abca1P41233 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Abca1P41233 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC15.63■□□□□ 0.09
Abca1P41233 Gm42911-201ENSMUST00000199360 1630 ntBASIC15.63■□□□□ 0.09
Abca1P41233 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
Abca1P41233 Gm7977-201ENSMUST00000193787 748 ntBASIC15.63■□□□□ 0.09
Abca1P41233 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Abca1P41233 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Abca1P41233 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Abca1P41233 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Abca1P41233 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Abca1P41233 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Abca1P41233 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Abca1P41233 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Abca1P41233 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Abca1P41233 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Abca1P41233 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Abca1P41233 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Abca1P41233 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Abca1P41233 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Abca1P41233 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
Abca1P41233 Gm37563-201ENSMUST00000192580 1513 ntBASIC15.62■□□□□ 0.09
Abca1P41233 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Abca1P41233 Gm44878-201ENSMUST00000205812 1295 ntBASIC15.62■□□□□ 0.09
Abca1P41233 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC15.62■□□□□ 0.09
Abca1P41233 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Abca1P41233 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Abca1P41233 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Abca1P41233 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC15.62■□□□□ 0.09
Abca1P41233 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms