Protein–RNA interactions for Protein: P38060

Hmgcl, Hydroxymethylglutaryl-CoA lyase, mitochondrial, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HmgclP38060 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
HmgclP38060 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HmgclP38060 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC18.72■□□□□ 0.59
HmgclP38060 Gm10493-201ENSMUST00000097270 612 ntBASIC18.72■□□□□ 0.59
HmgclP38060 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HmgclP38060 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HmgclP38060 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
HmgclP38060 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC18.72■□□□□ 0.59
HmgclP38060 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
HmgclP38060 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HmgclP38060 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
HmgclP38060 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HmgclP38060 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HmgclP38060 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HmgclP38060 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
HmgclP38060 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC18.71■□□□□ 0.59
HmgclP38060 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HmgclP38060 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
HmgclP38060 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
HmgclP38060 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
HmgclP38060 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HmgclP38060 Reep4-203ENSMUST00000226563 1444 ntBASIC18.71■□□□□ 0.59
HmgclP38060 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
HmgclP38060 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
HmgclP38060 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC18.71■□□□□ 0.59
HmgclP38060 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HmgclP38060 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
HmgclP38060 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HmgclP38060 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
HmgclP38060 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HmgclP38060 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HmgclP38060 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HmgclP38060 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC18.7■□□□□ 0.58
HmgclP38060 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
HmgclP38060 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
HmgclP38060 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC18.7■□□□□ 0.58
HmgclP38060 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HmgclP38060 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HmgclP38060 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HmgclP38060 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
HmgclP38060 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
HmgclP38060 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
HmgclP38060 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HmgclP38060 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
HmgclP38060 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC18.7■□□□□ 0.58
HmgclP38060 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HmgclP38060 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HmgclP38060 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HmgclP38060 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC18.7■□□□□ 0.58
HmgclP38060 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC18.69■□□□□ 0.58
HmgclP38060 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
HmgclP38060 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HmgclP38060 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HmgclP38060 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC18.69■□□□□ 0.58
HmgclP38060 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HmgclP38060 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
HmgclP38060 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HmgclP38060 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HmgclP38060 Gm13146-201ENSMUST00000118508 780 ntBASIC18.68■□□□□ 0.58
HmgclP38060 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HmgclP38060 CT010467.1-202ENSMUST00000205406 714 ntBASIC18.68■□□□□ 0.58
HmgclP38060 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC18.68■□□□□ 0.58
HmgclP38060 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
HmgclP38060 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC18.68■□□□□ 0.58
HmgclP38060 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HmgclP38060 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HmgclP38060 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
HmgclP38060 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
HmgclP38060 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HmgclP38060 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HmgclP38060 BC021767-201ENSMUST00000126387 1716 ntBASIC18.67■□□□□ 0.58
HmgclP38060 Gm13234-201ENSMUST00000120010 747 ntBASIC18.67■□□□□ 0.58
HmgclP38060 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC18.67■□□□□ 0.58
HmgclP38060 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HmgclP38060 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC18.67■□□□□ 0.58
HmgclP38060 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC18.67■□□□□ 0.58
HmgclP38060 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HmgclP38060 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HmgclP38060 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
HmgclP38060 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC18.67■□□□□ 0.58
HmgclP38060 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HmgclP38060 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HmgclP38060 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HmgclP38060 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HmgclP38060 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HmgclP38060 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HmgclP38060 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HmgclP38060 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
HmgclP38060 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HmgclP38060 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HmgclP38060 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HmgclP38060 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HmgclP38060 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
HmgclP38060 AC099934.2-201ENSMUST00000196389 70 ntBASIC18.65■□□□□ 0.58
HmgclP38060 AC156953.1-201ENSMUST00000196953 70 ntBASIC18.65■□□□□ 0.58
HmgclP38060 AC157822.2-201ENSMUST00000200291 70 ntBASIC18.65■□□□□ 0.58
HmgclP38060 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC18.65■□□□□ 0.58
HmgclP38060 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.65■□□□□ 0.58
HmgclP38060 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HmgclP38060 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms