Protein–RNA interactions for Protein: P35710

Sox5, Transcription factor SOX-5, mousemouse

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox5P35710 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
Sox5P35710 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Sox5P35710 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Sox5P35710 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Sox5P35710 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Sox5P35710 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Sox5P35710 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Sox5P35710 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Sox5P35710 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.91
Sox5P35710 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Sox5P35710 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC20.7■□□□□ 0.9
Sox5P35710 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC20.7■□□□□ 0.9
Sox5P35710 Gm15853-202ENSMUST00000195518 2041 ntBASIC20.7■□□□□ 0.9
Sox5P35710 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Sox5P35710 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Sox5P35710 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC20.7■□□□□ 0.9
Sox5P35710 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC20.7■□□□□ 0.9
Sox5P35710 Spcs1-204ENSMUST00000226782 949 ntBASIC20.7■□□□□ 0.9
Sox5P35710 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Sox5P35710 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Sox5P35710 Gm5576-201ENSMUST00000075809 1236 ntBASIC20.7■□□□□ 0.9
Sox5P35710 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Sox5P35710 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Sox5P35710 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Sox5P35710 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Sox5P35710 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Sox5P35710 Grk6-206ENSMUST00000224995 2971 ntBASIC20.7■□□□□ 0.9
Sox5P35710 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Sox5P35710 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Sox5P35710 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sox5P35710 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sox5P35710 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Sox5P35710 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Sox5P35710 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Sox5P35710 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Sox5P35710 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC20.69■□□□□ 0.9
Sox5P35710 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Sox5P35710 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sox5P35710 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Sox5P35710 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC20.68■□□□□ 0.9
Sox5P35710 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Sox5P35710 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Sox5P35710 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Sox5P35710 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Sox5P35710 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Sox5P35710 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Sox5P35710 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sox5P35710 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Sox5P35710 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC20.67■□□□□ 0.9
Sox5P35710 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sox5P35710 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sox5P35710 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Sox5P35710 Rarb-207ENSMUST00000225921 2756 ntBASIC20.67■□□□□ 0.9
Sox5P35710 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sox5P35710 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Sox5P35710 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sox5P35710 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC20.67■□□□□ 0.9
Sox5P35710 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sox5P35710 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sox5P35710 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sox5P35710 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sox5P35710 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC20.66■□□□□ 0.9
Sox5P35710 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Sox5P35710 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Sox5P35710 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Sox5P35710 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sox5P35710 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sox5P35710 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Sox5P35710 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC20.66■□□□□ 0.9
Sox5P35710 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC20.66■□□□□ 0.9
Sox5P35710 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Sox5P35710 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sox5P35710 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sox5P35710 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sox5P35710 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Sox5P35710 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sox5P35710 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sox5P35710 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sox5P35710 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sox5P35710 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sox5P35710 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sox5P35710 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sox5P35710 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Sox5P35710 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Sox5P35710 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Sox5P35710 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Sox5P35710 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC20.64■□□□□ 0.89
Sox5P35710 Gm12251-201ENSMUST00000117893 792 ntBASIC20.64■□□□□ 0.89
Sox5P35710 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC20.64■□□□□ 0.89
Sox5P35710 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Sox5P35710 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC20.64■□□□□ 0.89
Sox5P35710 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC20.64■□□□□ 0.89
Sox5P35710 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC20.64■□□□□ 0.89
Sox5P35710 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC20.64■□□□□ 0.89
Sox5P35710 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Sox5P35710 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Sox5P35710 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Sox5P35710 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Sox5P35710 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Sox5P35710 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC20.63■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms