Protein–RNA interactions for Protein: P35441

Thbs1, Thrombospondin-1, mousemouse

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs1P35441 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Thbs1P35441 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Thbs1P35441 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
Thbs1P35441 Gm8495-201ENSMUST00000188740 694 ntBASIC17.51■□□□□ 0.39
Thbs1P35441 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Thbs1P35441 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Thbs1P35441 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Thbs1P35441 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Thbs1P35441 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Thbs1P35441 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Thbs1P35441 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Thbs1P35441 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Thbs1P35441 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Thbs1P35441 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Thbs1P35441 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Thbs1P35441 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Thbs1P35441 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Thbs1P35441 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Thbs1P35441 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Thbs1P35441 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Thbs1P35441 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Thbs1P35441 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Thbs1P35441 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Thbs1P35441 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Thbs1P35441 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Thbs1P35441 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC17.49■□□□□ 0.39
Thbs1P35441 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Thbs1P35441 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Thbs1P35441 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Thbs1P35441 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Thbs1P35441 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Thbs1P35441 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Thbs1P35441 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Thbs1P35441 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Thbs1P35441 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Thbs1P35441 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Thbs1P35441 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC17.49■□□□□ 0.39
Thbs1P35441 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Thbs1P35441 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Thbs1P35441 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Thbs1P35441 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Thbs1P35441 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC17.48■□□□□ 0.39
Thbs1P35441 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Thbs1P35441 Rncr4-201ENSMUST00000194541 2234 ntBASIC17.48■□□□□ 0.39
Thbs1P35441 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Thbs1P35441 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Thbs1P35441 Gm18284-201ENSMUST00000172604 624 ntBASIC17.48■□□□□ 0.39
Thbs1P35441 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Thbs1P35441 Gm43017-201ENSMUST00000198296 752 ntBASIC17.48■□□□□ 0.39
Thbs1P35441 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Thbs1P35441 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Thbs1P35441 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Thbs1P35441 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Thbs1P35441 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Thbs1P35441 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Thbs1P35441 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC17.47■□□□□ 0.39
Thbs1P35441 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Thbs1P35441 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Thbs1P35441 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Thbs1P35441 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC17.47■□□□□ 0.39
Thbs1P35441 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Thbs1P35441 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Thbs1P35441 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Thbs1P35441 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Thbs1P35441 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Thbs1P35441 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Thbs1P35441 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
Thbs1P35441 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC17.47■□□□□ 0.39
Thbs1P35441 Gm40848-201ENSMUST00000221998 324 ntBASIC17.47■□□□□ 0.39
Thbs1P35441 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Thbs1P35441 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Thbs1P35441 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Thbs1P35441 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Thbs1P35441 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Thbs1P35441 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Thbs1P35441 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Thbs1P35441 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Thbs1P35441 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Thbs1P35441 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Thbs1P35441 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Thbs1P35441 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Thbs1P35441 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Thbs1P35441 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Thbs1P35441 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
Thbs1P35441 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
Thbs1P35441 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Thbs1P35441 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Thbs1P35441 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Thbs1P35441 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Thbs1P35441 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Thbs1P35441 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Thbs1P35441 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Thbs1P35441 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC17.46■□□□□ 0.39
Thbs1P35441 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
Thbs1P35441 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.38
Thbs1P35441 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Thbs1P35441 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC17.46■□□□□ 0.38
Thbs1P35441 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Thbs1P35441 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Thbs1P35441 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms