Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Slc6a1P31648 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Slc6a1P31648 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Slc6a1P31648 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC16.29■□□□□ 0.2
Slc6a1P31648 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Slc6a1P31648 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Slc6a1P31648 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Slc6a1P31648 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Slc6a1P31648 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Slc6a1P31648 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Slc6a1P31648 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Slc6a1P31648 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC16.29■□□□□ 0.2
Slc6a1P31648 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Slc6a1P31648 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Slc6a1P31648 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Slc6a1P31648 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Slc6a1P31648 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Slc6a1P31648 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Slc6a1P31648 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Slc6a1P31648 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Slc6a1P31648 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Slc6a1P31648 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Slc6a1P31648 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Slc6a1P31648 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Slc6a1P31648 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC16.28■□□□□ 0.2
Slc6a1P31648 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Slc6a1P31648 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC16.28■□□□□ 0.2
Slc6a1P31648 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Slc6a1P31648 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC16.28■□□□□ 0.2
Slc6a1P31648 AC123834.2-201ENSMUST00000224038 2340 ntBASIC16.28■□□□□ 0.2
Slc6a1P31648 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Slc6a1P31648 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Slc6a1P31648 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Slc6a1P31648 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Slc6a1P31648 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Slc6a1P31648 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Slc6a1P31648 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Slc6a1P31648 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
Slc6a1P31648 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC16.27■□□□□ 0.2
Slc6a1P31648 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC16.27■□□□□ 0.2
Slc6a1P31648 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Slc6a1P31648 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Slc6a1P31648 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
Slc6a1P31648 Gm15853-202ENSMUST00000195518 2041 ntBASIC16.27■□□□□ 0.2
Slc6a1P31648 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Slc6a1P31648 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Slc6a1P31648 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Slc6a1P31648 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Slc6a1P31648 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Slc6a1P31648 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Slc6a1P31648 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Slc6a1P31648 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC16.26■□□□□ 0.19
Slc6a1P31648 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Slc6a1P31648 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Slc6a1P31648 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Slc6a1P31648 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Slc6a1P31648 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Slc6a1P31648 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC16.26■□□□□ 0.19
Slc6a1P31648 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Slc6a1P31648 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Slc6a1P31648 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Slc6a1P31648 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Slc6a1P31648 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Slc6a1P31648 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Slc6a1P31648 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Slc6a1P31648 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Slc6a1P31648 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Slc6a1P31648 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC16.25■□□□□ 0.19
Slc6a1P31648 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Slc6a1P31648 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Slc6a1P31648 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Slc6a1P31648 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Slc6a1P31648 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Slc6a1P31648 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Slc6a1P31648 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Slc6a1P31648 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Slc6a1P31648 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC16.24■□□□□ 0.19
Slc6a1P31648 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC16.24■□□□□ 0.19
Slc6a1P31648 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Slc6a1P31648 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Slc6a1P31648 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Slc6a1P31648 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Slc6a1P31648 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Slc6a1P31648 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Slc6a1P31648 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Slc6a1P31648 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Slc6a1P31648 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Slc6a1P31648 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Slc6a1P31648 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Slc6a1P31648 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Slc6a1P31648 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Slc6a1P31648 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Slc6a1P31648 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Slc6a1P31648 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC16.23■□□□□ 0.19
Slc6a1P31648 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Slc6a1P31648 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC16.23■□□□□ 0.19
Slc6a1P31648 Gm22238-201ENSMUST00000175222 88 ntBASIC16.23■□□□□ 0.19
Slc6a1P31648 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC16.23■□□□□ 0.19
Slc6a1P31648 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC16.23■□□□□ 0.19
Slc6a1P31648 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms