Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nedd8P29595 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nedd8P29595 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nedd8P29595 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nedd8P29595 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nedd8P29595 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Nedd8P29595 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nedd8P29595 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Nedd8P29595 Gm42922-201ENSMUST00000195887 2078 ntBASIC17.59■□□□□ 0.41
Nedd8P29595 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nedd8P29595 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nedd8P29595 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Nedd8P29595 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Nedd8P29595 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Nedd8P29595 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Nedd8P29595 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.58■□□□□ 0.41
Nedd8P29595 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC17.58■□□□□ 0.41
Nedd8P29595 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Nedd8P29595 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nedd8P29595 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nedd8P29595 Gm10620-201ENSMUST00000098379 1332 ntBASIC17.58■□□□□ 0.4
Nedd8P29595 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Nedd8P29595 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
Nedd8P29595 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Nedd8P29595 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Nedd8P29595 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Nedd8P29595 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nedd8P29595 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nedd8P29595 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.57■□□□□ 0.4
Nedd8P29595 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Nedd8P29595 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nedd8P29595 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nedd8P29595 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nedd8P29595 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nedd8P29595 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nedd8P29595 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nedd8P29595 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nedd8P29595 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nedd8P29595 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nedd8P29595 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nedd8P29595 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC17.56■□□□□ 0.4
Nedd8P29595 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nedd8P29595 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nedd8P29595 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nedd8P29595 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Nedd8P29595 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.56■□□□□ 0.4
Nedd8P29595 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Nedd8P29595 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC17.56■□□□□ 0.4
Nedd8P29595 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nedd8P29595 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nedd8P29595 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nedd8P29595 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nedd8P29595 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nedd8P29595 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nedd8P29595 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC17.56■□□□□ 0.4
Nedd8P29595 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nedd8P29595 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
Nedd8P29595 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nedd8P29595 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
Nedd8P29595 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nedd8P29595 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Nedd8P29595 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nedd8P29595 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC17.55■□□□□ 0.4
Nedd8P29595 Gm37352-201ENSMUST00000193908 2181 ntBASIC17.55■□□□□ 0.4
Nedd8P29595 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Nedd8P29595 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Nedd8P29595 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC17.55■□□□□ 0.4
Nedd8P29595 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nedd8P29595 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Nedd8P29595 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.55■□□□□ 0.4
Nedd8P29595 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nedd8P29595 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Nedd8P29595 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Nedd8P29595 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nedd8P29595 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.54■□□□□ 0.4
Nedd8P29595 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Nedd8P29595 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC17.54■□□□□ 0.4
Nedd8P29595 Mir6236-201ENSMUST00000184437 123 ntBASIC17.54■□□□□ 0.4
Nedd8P29595 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nedd8P29595 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nedd8P29595 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC17.54■□□□□ 0.4
Nedd8P29595 AC123834.2-201ENSMUST00000224038 2340 ntBASIC17.54■□□□□ 0.4
Nedd8P29595 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Nedd8P29595 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.54■□□□□ 0.4
Nedd8P29595 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC17.54■□□□□ 0.4
Nedd8P29595 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Nedd8P29595 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC17.53■□□□□ 0.4
Nedd8P29595 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Nedd8P29595 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Nedd8P29595 Fst-202ENSMUST00000223640 2612 ntBASIC17.53■□□□□ 0.4
Nedd8P29595 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Nedd8P29595 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC17.53■□□□□ 0.4
Nedd8P29595 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nedd8P29595 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nedd8P29595 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Nedd8P29595 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nedd8P29595 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nedd8P29595 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Nedd8P29595 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nedd8P29595 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms