Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nckap1P28660 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nckap1P28660 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nckap1P28660 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nckap1P28660 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nckap1P28660 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Nckap1P28660 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nckap1P28660 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nckap1P28660 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nckap1P28660 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Nckap1P28660 Gm20760-201ENSMUST00000179197 648 ntBASIC18.85■□□□□ 0.61
Nckap1P28660 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC18.85■□□□□ 0.61
Nckap1P28660 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nckap1P28660 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC18.85■□□□□ 0.61
Nckap1P28660 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Nckap1P28660 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nckap1P28660 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Nckap1P28660 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nckap1P28660 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nckap1P28660 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nckap1P28660 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nckap1P28660 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nckap1P28660 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nckap1P28660 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Nckap1P28660 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Nckap1P28660 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Nckap1P28660 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC18.84■□□□□ 0.61
Nckap1P28660 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Nckap1P28660 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nckap1P28660 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nckap1P28660 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nckap1P28660 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.84■□□□□ 0.61
Nckap1P28660 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC18.84■□□□□ 0.61
Nckap1P28660 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Nckap1P28660 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Nckap1P28660 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Nckap1P28660 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Nckap1P28660 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Nckap1P28660 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC18.83■□□□□ 0.61
Nckap1P28660 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Nckap1P28660 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Nckap1P28660 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nckap1P28660 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nckap1P28660 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nckap1P28660 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Nckap1P28660 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nckap1P28660 Gm43859-201ENSMUST00000200075 1412 ntBASIC18.83■□□□□ 0.6
Nckap1P28660 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Nckap1P28660 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nckap1P28660 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nckap1P28660 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nckap1P28660 Gm10653-202ENSMUST00000139570 835 ntBASIC18.82■□□□□ 0.6
Nckap1P28660 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC18.82■□□□□ 0.6
Nckap1P28660 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC18.82■□□□□ 0.6
Nckap1P28660 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nckap1P28660 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nckap1P28660 AC131586.2-201ENSMUST00000228370 1512 ntBASIC18.82■□□□□ 0.6
Nckap1P28660 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nckap1P28660 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Nckap1P28660 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Nckap1P28660 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nckap1P28660 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Nckap1P28660 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Nckap1P28660 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Nckap1P28660 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Nckap1P28660 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Nckap1P28660 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nckap1P28660 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Nckap1P28660 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Nckap1P28660 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Nckap1P28660 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Nckap1P28660 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nckap1P28660 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Nckap1P28660 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nckap1P28660 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nckap1P28660 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nckap1P28660 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nckap1P28660 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Nckap1P28660 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC18.8■□□□□ 0.6
Nckap1P28660 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Nckap1P28660 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nckap1P28660 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
Nckap1P28660 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nckap1P28660 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nckap1P28660 Gm20100-201ENSMUST00000209418 2272 ntBASIC18.8■□□□□ 0.6
Nckap1P28660 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nckap1P28660 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC18.8■□□□□ 0.6
Nckap1P28660 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nckap1P28660 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nckap1P28660 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC18.79■□□□□ 0.6
Nckap1P28660 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Nckap1P28660 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nckap1P28660 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nckap1P28660 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nckap1P28660 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Nckap1P28660 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Nckap1P28660 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Nckap1P28660 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Nckap1P28660 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nckap1P28660 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms