Protein–RNA interactions for Protein: P28236

Gja8, Gap junction alpha-8 protein, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gja8P28236 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC21.15■□□□□ 0.98
Gja8P28236 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Gja8P28236 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Gja8P28236 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Gja8P28236 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Gja8P28236 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Gja8P28236 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Gja8P28236 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Gja8P28236 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Gja8P28236 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Gja8P28236 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Gja8P28236 Gm18666-201ENSMUST00000190039 958 ntBASIC21.14■□□□□ 0.97
Gja8P28236 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Gja8P28236 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Gja8P28236 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
Gja8P28236 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Gja8P28236 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Gja8P28236 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Gja8P28236 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC21.13■□□□□ 0.97
Gja8P28236 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Gja8P28236 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC21.13■□□□□ 0.97
Gja8P28236 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Gja8P28236 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Gja8P28236 Mir1199-201ENSMUST00000117015 119 ntBASIC21.13■□□□□ 0.97
Gja8P28236 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Gja8P28236 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Gja8P28236 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Gja8P28236 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC21.13■□□□□ 0.97
Gja8P28236 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Gja8P28236 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
Gja8P28236 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Gja8P28236 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Gja8P28236 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Gja8P28236 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC21.12■□□□□ 0.97
Gja8P28236 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Gja8P28236 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Gja8P28236 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Gja8P28236 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Gja8P28236 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Gja8P28236 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Gja8P28236 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Gja8P28236 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Gja8P28236 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Gja8P28236 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Gja8P28236 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC21.11■□□□□ 0.97
Gja8P28236 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Gja8P28236 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Gja8P28236 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC21.11■□□□□ 0.97
Gja8P28236 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC21.11■□□□□ 0.97
Gja8P28236 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Gja8P28236 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Gja8P28236 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Gja8P28236 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Gja8P28236 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC21.11■□□□□ 0.97
Gja8P28236 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Gja8P28236 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Gja8P28236 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Gja8P28236 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Gja8P28236 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Gja8P28236 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Gja8P28236 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Gja8P28236 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Gja8P28236 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Gja8P28236 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC21.1■□□□□ 0.97
Gja8P28236 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC21.1■□□□□ 0.97
Gja8P28236 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Gja8P28236 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Gja8P28236 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Gja8P28236 Nrn1-203ENSMUST00000223611 1443 ntBASIC21.1■□□□□ 0.97
Gja8P28236 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Gja8P28236 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Gja8P28236 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Gja8P28236 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
Gja8P28236 AC153881.2-201ENSMUST00000214877 204 ntBASIC21.09■□□□□ 0.97
Gja8P28236 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
Gja8P28236 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Gja8P28236 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Gja8P28236 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Gja8P28236 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC21.08■□□□□ 0.97
Gja8P28236 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Gja8P28236 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
Gja8P28236 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Gja8P28236 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Gja8P28236 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC21.08■□□□□ 0.97
Gja8P28236 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Gja8P28236 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Gja8P28236 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Gja8P28236 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Gja8P28236 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Gja8P28236 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Gja8P28236 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Gja8P28236 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Gja8P28236 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Gja8P28236 Gm11249-201ENSMUST00000117071 859 ntBASIC21.07■□□□□ 0.96
Gja8P28236 Gm15378-201ENSMUST00000121894 207 ntBASIC21.07■□□□□ 0.96
Gja8P28236 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Gja8P28236 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Gja8P28236 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Gja8P28236 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC21.07■□□□□ 0.96
Gja8P28236 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms