Protein–RNA interactions for Protein: P23198

Cbx3, Chromobox protein homolog 3, mousemouse

Known RBP Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx3P23198 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cbx3P23198 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC17.21■□□□□ 0.35
Cbx3P23198 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Cbx3P23198 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC17.21■□□□□ 0.35
Cbx3P23198 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cbx3P23198 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cbx3P23198 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Cbx3P23198 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cbx3P23198 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Cbx3P23198 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cbx3P23198 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC17.21■□□□□ 0.34
Cbx3P23198 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
Cbx3P23198 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cbx3P23198 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cbx3P23198 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cbx3P23198 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cbx3P23198 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cbx3P23198 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Cbx3P23198 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Cbx3P23198 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Cbx3P23198 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Cbx3P23198 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cbx3P23198 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Cbx3P23198 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cbx3P23198 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC17.2■□□□□ 0.34
Cbx3P23198 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Cbx3P23198 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cbx3P23198 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Cbx3P23198 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cbx3P23198 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cbx3P23198 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Cbx3P23198 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Cbx3P23198 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cbx3P23198 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Cbx3P23198 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cbx3P23198 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cbx3P23198 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cbx3P23198 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cbx3P23198 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Cbx3P23198 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC17.18■□□□□ 0.34
Cbx3P23198 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Cbx3P23198 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Cbx3P23198 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cbx3P23198 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC17.18■□□□□ 0.34
Cbx3P23198 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC17.18■□□□□ 0.34
Cbx3P23198 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cbx3P23198 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Cbx3P23198 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cbx3P23198 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Cbx3P23198 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cbx3P23198 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cbx3P23198 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cbx3P23198 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cbx3P23198 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cbx3P23198 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC17.17■□□□□ 0.34
Cbx3P23198 Nsd1-206ENSMUST00000224918 1001 ntBASIC17.17■□□□□ 0.34
Cbx3P23198 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cbx3P23198 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cbx3P23198 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cbx3P23198 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cbx3P23198 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cbx3P23198 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cbx3P23198 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cbx3P23198 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cbx3P23198 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC17.16■□□□□ 0.34
Cbx3P23198 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cbx3P23198 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cbx3P23198 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.16■□□□□ 0.34
Cbx3P23198 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC17.16■□□□□ 0.34
Cbx3P23198 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cbx3P23198 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Cbx3P23198 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Cbx3P23198 Gm5067-201ENSMUST00000170449 1009 ntBASIC17.16■□□□□ 0.34
Cbx3P23198 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cbx3P23198 AC116713.1-201ENSMUST00000215074 430 ntBASIC17.16■□□□□ 0.34
Cbx3P23198 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cbx3P23198 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Cbx3P23198 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cbx3P23198 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cbx3P23198 Gm15743-202ENSMUST00000182690 1901 ntBASIC17.15■□□□□ 0.34
Cbx3P23198 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cbx3P23198 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cbx3P23198 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Cbx3P23198 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cbx3P23198 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cbx3P23198 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cbx3P23198 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Cbx3P23198 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC17.15■□□□□ 0.34
Cbx3P23198 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cbx3P23198 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cbx3P23198 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cbx3P23198 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cbx3P23198 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cbx3P23198 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cbx3P23198 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cbx3P23198 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Cbx3P23198 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cbx3P23198 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cbx3P23198 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cbx3P23198 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms