Protein–RNA interactions for Protein: P20782

Chrne, Acetylcholine receptor subunit epsilon, mousemouse

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChrneP20782 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
ChrneP20782 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC17.88■□□□□ 0.45
ChrneP20782 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC17.88■□□□□ 0.45
ChrneP20782 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ChrneP20782 Gm9988-201ENSMUST00000069786 435 ntBASIC17.88■□□□□ 0.45
ChrneP20782 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ChrneP20782 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.88■□□□□ 0.45
ChrneP20782 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC17.88■□□□□ 0.45
ChrneP20782 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ChrneP20782 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ChrneP20782 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
ChrneP20782 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ChrneP20782 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
ChrneP20782 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
ChrneP20782 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ChrneP20782 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ChrneP20782 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ChrneP20782 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ChrneP20782 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ChrneP20782 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ChrneP20782 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ChrneP20782 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
ChrneP20782 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ChrneP20782 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
ChrneP20782 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
ChrneP20782 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ChrneP20782 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ChrneP20782 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ChrneP20782 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ChrneP20782 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ChrneP20782 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC17.86■□□□□ 0.45
ChrneP20782 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ChrneP20782 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ChrneP20782 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
ChrneP20782 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
ChrneP20782 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
ChrneP20782 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC17.86■□□□□ 0.45
ChrneP20782 Gm10849-201ENSMUST00000100397 618 ntBASIC17.85■□□□□ 0.45
ChrneP20782 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ChrneP20782 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC17.85■□□□□ 0.45
ChrneP20782 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC17.85■□□□□ 0.45
ChrneP20782 Gm10033-202ENSMUST00000211874 928 ntBASIC17.85■□□□□ 0.45
ChrneP20782 Slc35b2-207ENSMUST00000226086 850 ntBASIC17.85■□□□□ 0.45
ChrneP20782 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ChrneP20782 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
ChrneP20782 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ChrneP20782 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
ChrneP20782 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ChrneP20782 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
ChrneP20782 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ChrneP20782 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ChrneP20782 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
ChrneP20782 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
ChrneP20782 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
ChrneP20782 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ChrneP20782 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC17.84■□□□□ 0.45
ChrneP20782 Gm13234-201ENSMUST00000120010 747 ntBASIC17.84■□□□□ 0.45
ChrneP20782 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ChrneP20782 Gm42569-201ENSMUST00000200539 472 ntBASIC17.84■□□□□ 0.45
ChrneP20782 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC17.84■□□□□ 0.45
ChrneP20782 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ChrneP20782 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
ChrneP20782 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC17.84■□□□□ 0.45
ChrneP20782 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
ChrneP20782 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ChrneP20782 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
ChrneP20782 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
ChrneP20782 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC17.83■□□□□ 0.45
ChrneP20782 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
ChrneP20782 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
ChrneP20782 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC17.83■□□□□ 0.44
ChrneP20782 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ChrneP20782 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
ChrneP20782 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ChrneP20782 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ChrneP20782 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ChrneP20782 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ChrneP20782 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
ChrneP20782 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ChrneP20782 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC17.82■□□□□ 0.44
ChrneP20782 AV356131-201ENSMUST00000206201 750 ntBASIC17.82■□□□□ 0.44
ChrneP20782 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
ChrneP20782 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ChrneP20782 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ChrneP20782 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ChrneP20782 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
ChrneP20782 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
ChrneP20782 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
ChrneP20782 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.81■□□□□ 0.44
ChrneP20782 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
ChrneP20782 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ChrneP20782 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ChrneP20782 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
ChrneP20782 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ChrneP20782 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ChrneP20782 Gm27405-201ENSMUST00000184201 112 ntBASIC17.81■□□□□ 0.44
ChrneP20782 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC17.81■□□□□ 0.44
ChrneP20782 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC17.81■□□□□ 0.44
ChrneP20782 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
ChrneP20782 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms