Protein–RNA interactions for Protein: P18181

Cd48, CD48 antigen, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd48P18181 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cd48P18181 Gm38342-201ENSMUST00000195710 2980 ntBASIC16.96■□□□□ 0.31
Cd48P18181 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cd48P18181 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cd48P18181 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Cd48P18181 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cd48P18181 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC16.96■□□□□ 0.31
Cd48P18181 Serp2-204ENSMUST00000228055 705 ntBASIC16.96■□□□□ 0.31
Cd48P18181 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cd48P18181 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Cd48P18181 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Cd48P18181 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Cd48P18181 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cd48P18181 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cd48P18181 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.3
Cd48P18181 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Cd48P18181 Gm42911-201ENSMUST00000199360 1630 ntBASIC16.96■□□□□ 0.3
Cd48P18181 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Cd48P18181 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Cd48P18181 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cd48P18181 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Cd48P18181 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Cd48P18181 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cd48P18181 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cd48P18181 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Cd48P18181 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cd48P18181 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Cd48P18181 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cd48P18181 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Cd48P18181 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cd48P18181 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cd48P18181 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cd48P18181 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cd48P18181 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
Cd48P18181 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cd48P18181 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Cd48P18181 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Cd48P18181 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cd48P18181 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cd48P18181 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cd48P18181 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Cd48P18181 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Cd48P18181 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cd48P18181 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC16.94■□□□□ 0.3
Cd48P18181 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cd48P18181 Gm13241-201ENSMUST00000094493 780 ntBASIC16.94■□□□□ 0.3
Cd48P18181 Fam105a-203ENSMUST00000226170 3043 ntBASIC16.94■□□□□ 0.3
Cd48P18181 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Cd48P18181 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cd48P18181 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
Cd48P18181 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Cd48P18181 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cd48P18181 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cd48P18181 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cd48P18181 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cd48P18181 Gm45640-201ENSMUST00000210665 1896 ntBASIC16.93■□□□□ 0.3
Cd48P18181 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cd48P18181 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Cd48P18181 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Cd48P18181 AC124603.1-201ENSMUST00000223843 308 ntBASIC16.93■□□□□ 0.3
Cd48P18181 Spcs1-204ENSMUST00000226782 949 ntBASIC16.93■□□□□ 0.3
Cd48P18181 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Cd48P18181 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cd48P18181 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cd48P18181 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cd48P18181 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Cd48P18181 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC16.93■□□□□ 0.3
Cd48P18181 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Cd48P18181 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Cd48P18181 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cd48P18181 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cd48P18181 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Cd48P18181 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cd48P18181 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cd48P18181 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cd48P18181 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cd48P18181 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Cd48P18181 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Cd48P18181 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Cd48P18181 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Cd48P18181 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Cd48P18181 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Cd48P18181 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cd48P18181 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Cd48P18181 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cd48P18181 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Cd48P18181 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cd48P18181 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Cd48P18181 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Cd48P18181 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC16.91■□□□□ 0.3
Cd48P18181 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC16.91■□□□□ 0.3
Cd48P18181 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC16.91■□□□□ 0.3
Cd48P18181 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cd48P18181 Rarb-207ENSMUST00000225921 2756 ntBASIC16.91■□□□□ 0.3
Cd48P18181 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Cd48P18181 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cd48P18181 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cd48P18181 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cd48P18181 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cd48P18181 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms