Protein–RNA interactions for Protein: P14576

Srp54, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54P14576 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Srp54P14576 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Srp54P14576 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Srp54P14576 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
Srp54P14576 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
Srp54P14576 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Srp54P14576 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Srp54P14576 Gm6365-201ENSMUST00000054711 744 ntBASIC18.58■□□□□ 0.56
Srp54P14576 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Srp54P14576 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Srp54P14576 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC18.58■□□□□ 0.56
Srp54P14576 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Srp54P14576 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Srp54P14576 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Srp54P14576 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Srp54P14576 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Srp54P14576 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC18.57■□□□□ 0.56
Srp54P14576 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Srp54P14576 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Srp54P14576 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC18.57■□□□□ 0.56
Srp54P14576 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.57■□□□□ 0.56
Srp54P14576 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Srp54P14576 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.56■□□□□ 0.56
Srp54P14576 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Srp54P14576 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Srp54P14576 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Srp54P14576 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Srp54P14576 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Srp54P14576 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC18.56■□□□□ 0.56
Srp54P14576 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC18.56■□□□□ 0.56
Srp54P14576 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Srp54P14576 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Srp54P14576 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Srp54P14576 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Srp54P14576 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Srp54P14576 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Srp54P14576 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Srp54P14576 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Srp54P14576 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC18.56■□□□□ 0.56
Srp54P14576 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Srp54P14576 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Srp54P14576 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Srp54P14576 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Srp54P14576 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Srp54P14576 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Srp54P14576 Gm7290-201ENSMUST00000104990 617 ntBASIC18.55■□□□□ 0.56
Srp54P14576 Gm12918-201ENSMUST00000120234 636 ntBASIC18.55■□□□□ 0.56
Srp54P14576 Gm15710-201ENSMUST00000121821 636 ntBASIC18.55■□□□□ 0.56
Srp54P14576 Gm5075-201ENSMUST00000196916 622 ntBASIC18.55■□□□□ 0.56
Srp54P14576 AC112142.1-201ENSMUST00000228796 918 ntBASIC18.55■□□□□ 0.56
Srp54P14576 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.55■□□□□ 0.56
Srp54P14576 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.55■□□□□ 0.56
Srp54P14576 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
Srp54P14576 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Srp54P14576 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Srp54P14576 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Srp54P14576 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Srp54P14576 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Srp54P14576 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Srp54P14576 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Srp54P14576 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Srp54P14576 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Srp54P14576 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC18.54■□□□□ 0.56
Srp54P14576 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC18.54■□□□□ 0.56
Srp54P14576 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC18.54■□□□□ 0.56
Srp54P14576 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Srp54P14576 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Srp54P14576 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC18.54■□□□□ 0.56
Srp54P14576 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Srp54P14576 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Srp54P14576 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Srp54P14576 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Srp54P14576 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Srp54P14576 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
Srp54P14576 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Srp54P14576 Gm27032-201ENSMUST00000183124 1116 ntBASIC18.53■□□□□ 0.56
Srp54P14576 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Srp54P14576 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Srp54P14576 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Srp54P14576 Gm32699-201ENSMUST00000221728 1988 ntBASIC18.53■□□□□ 0.56
Srp54P14576 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC18.53■□□□□ 0.56
Srp54P14576 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Srp54P14576 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Srp54P14576 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Srp54P14576 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Srp54P14576 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Srp54P14576 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Srp54P14576 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Srp54P14576 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Srp54P14576 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Srp54P14576 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Srp54P14576 Gm27011-201ENSMUST00000182352 972 ntBASIC18.52■□□□□ 0.56
Srp54P14576 Gm3807-201ENSMUST00000193520 1168 ntBASIC18.52■□□□□ 0.56
Srp54P14576 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC18.52■□□□□ 0.56
Srp54P14576 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Srp54P14576 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Srp54P14576 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Srp54P14576 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Srp54P14576 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
Srp54P14576 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms