Protein–RNA interactions for Protein: P08122

Col4a2, Collagen alpha-2(IV) chain, mousemouse

Predictions only

Length 1,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a2P08122 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC17.88■□□□□ 0.45
Col4a2P08122 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Col4a2P08122 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Col4a2P08122 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Col4a2P08122 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC17.87■□□□□ 0.45
Col4a2P08122 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Col4a2P08122 Gm5643-201ENSMUST00000117081 966 ntBASIC17.87■□□□□ 0.45
Col4a2P08122 AC135963.1-201ENSMUST00000211640 717 ntBASIC17.87■□□□□ 0.45
Col4a2P08122 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Col4a2P08122 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Col4a2P08122 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Col4a2P08122 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC17.87■□□□□ 0.45
Col4a2P08122 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Col4a2P08122 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Col4a2P08122 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Col4a2P08122 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC17.86■□□□□ 0.45
Col4a2P08122 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Col4a2P08122 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Col4a2P08122 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
Col4a2P08122 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Col4a2P08122 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Col4a2P08122 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Col4a2P08122 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Col4a2P08122 Gm12896-201ENSMUST00000118430 226 ntBASIC17.86■□□□□ 0.45
Col4a2P08122 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Col4a2P08122 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC17.86■□□□□ 0.45
Col4a2P08122 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC17.86■□□□□ 0.45
Col4a2P08122 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Col4a2P08122 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Col4a2P08122 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Col4a2P08122 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Col4a2P08122 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Col4a2P08122 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Col4a2P08122 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Col4a2P08122 Gm20100-201ENSMUST00000209418 2272 ntBASIC17.85■□□□□ 0.45
Col4a2P08122 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Col4a2P08122 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Col4a2P08122 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Col4a2P08122 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC17.85■□□□□ 0.45
Col4a2P08122 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC17.85■□□□□ 0.45
Col4a2P08122 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Col4a2P08122 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Col4a2P08122 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Col4a2P08122 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Col4a2P08122 Dio3-201ENSMUST00000097228 1449 ntBASIC17.85■□□□□ 0.45
Col4a2P08122 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
Col4a2P08122 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Col4a2P08122 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Col4a2P08122 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Col4a2P08122 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Col4a2P08122 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Col4a2P08122 Gm7977-201ENSMUST00000193787 748 ntBASIC17.84■□□□□ 0.45
Col4a2P08122 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Col4a2P08122 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Col4a2P08122 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Col4a2P08122 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC17.84■□□□□ 0.45
Col4a2P08122 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Col4a2P08122 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Col4a2P08122 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Col4a2P08122 Gm13836-201ENSMUST00000121159 501 ntBASIC17.83■□□□□ 0.44
Col4a2P08122 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Col4a2P08122 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Col4a2P08122 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Col4a2P08122 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Col4a2P08122 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Col4a2P08122 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC17.82■□□□□ 0.44
Col4a2P08122 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Col4a2P08122 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC17.82■□□□□ 0.44
Col4a2P08122 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Col4a2P08122 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC17.82■□□□□ 0.44
Col4a2P08122 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Col4a2P08122 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Col4a2P08122 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Col4a2P08122 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Col4a2P08122 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Col4a2P08122 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Col4a2P08122 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Col4a2P08122 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Col4a2P08122 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Col4a2P08122 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Col4a2P08122 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Col4a2P08122 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Col4a2P08122 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Col4a2P08122 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Col4a2P08122 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Col4a2P08122 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Col4a2P08122 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Col4a2P08122 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Col4a2P08122 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Col4a2P08122 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Col4a2P08122 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
Col4a2P08122 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Col4a2P08122 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Col4a2P08122 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Col4a2P08122 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Col4a2P08122 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Col4a2P08122 Gm715-201ENSMUST00000117865 831 ntBASIC17.8■□□□□ 0.44
Col4a2P08122 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Col4a2P08122 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Col4a2P08122 Gm2559-201ENSMUST00000201323 363 ntBASIC17.8■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms