Protein–RNA interactions for Protein: P04441

Cd74, H-2 class II histocompatibility antigen gamma chain, mousemouse

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd74P04441 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC15.86■□□□□ 0.13
Cd74P04441 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cd74P04441 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cd74P04441 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC15.86■□□□□ 0.13
Cd74P04441 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Cd74P04441 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cd74P04441 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Cd74P04441 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC15.86■□□□□ 0.13
Cd74P04441 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Cd74P04441 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cd74P04441 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cd74P04441 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC15.86■□□□□ 0.13
Cd74P04441 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Cd74P04441 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Cd74P04441 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cd74P04441 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cd74P04441 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cd74P04441 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC15.86■□□□□ 0.13
Cd74P04441 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Cd74P04441 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cd74P04441 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cd74P04441 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC15.85■□□□□ 0.13
Cd74P04441 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC15.85■□□□□ 0.13
Cd74P04441 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Cd74P04441 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cd74P04441 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC15.85■□□□□ 0.13
Cd74P04441 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
Cd74P04441 AC099934.2-201ENSMUST00000196389 70 ntBASIC15.85■□□□□ 0.13
Cd74P04441 AC156953.1-201ENSMUST00000196953 70 ntBASIC15.85■□□□□ 0.13
Cd74P04441 AC157822.2-201ENSMUST00000200291 70 ntBASIC15.85■□□□□ 0.13
Cd74P04441 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cd74P04441 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cd74P04441 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cd74P04441 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Cd74P04441 Gm44832-201ENSMUST00000208849 2303 ntBASIC15.85■□□□□ 0.13
Cd74P04441 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC15.85■□□□□ 0.13
Cd74P04441 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cd74P04441 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cd74P04441 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cd74P04441 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Cd74P04441 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cd74P04441 AC165080.2-201ENSMUST00000217491 1530 ntBASIC15.84■□□□□ 0.13
Cd74P04441 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
Cd74P04441 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC15.84■□□□□ 0.13
Cd74P04441 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Cd74P04441 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cd74P04441 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cd74P04441 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cd74P04441 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cd74P04441 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC15.84■□□□□ 0.13
Cd74P04441 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cd74P04441 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cd74P04441 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cd74P04441 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC15.84■□□□□ 0.13
Cd74P04441 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cd74P04441 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cd74P04441 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cd74P04441 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Cd74P04441 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cd74P04441 AC122428.2-201ENSMUST00000216321 1832 ntBASIC15.83■□□□□ 0.12
Cd74P04441 Gm5784-201ENSMUST00000179344 2478 ntBASIC15.83■□□□□ 0.12
Cd74P04441 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cd74P04441 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cd74P04441 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Cd74P04441 Gm5297-201ENSMUST00000198555 1171 ntBASIC15.83■□□□□ 0.12
Cd74P04441 Gm42642-201ENSMUST00000200683 355 ntBASIC15.83■□□□□ 0.12
Cd74P04441 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Cd74P04441 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cd74P04441 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Cd74P04441 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cd74P04441 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cd74P04441 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Cd74P04441 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cd74P04441 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cd74P04441 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Cd74P04441 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cd74P04441 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Cd74P04441 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Cd74P04441 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC15.82■□□□□ 0.12
Cd74P04441 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cd74P04441 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cd74P04441 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC15.82■□□□□ 0.12
Cd74P04441 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cd74P04441 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Cd74P04441 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cd74P04441 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cd74P04441 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC15.82■□□□□ 0.12
Cd74P04441 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cd74P04441 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cd74P04441 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Cd74P04441 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cd74P04441 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Cd74P04441 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC15.81■□□□□ 0.12
Cd74P04441 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Cd74P04441 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cd74P04441 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cd74P04441 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cd74P04441 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cd74P04441 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cd74P04441 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC15.81■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms