Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
Col4a1P02463 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
Col4a1P02463 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Col4a1P02463 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Col4a1P02463 Gm11249-201ENSMUST00000117071 859 ntBASIC23.67■■□□□ 1.38
Col4a1P02463 Gm10698-201ENSMUST00000182663 604 ntBASIC23.67■■□□□ 1.38
Col4a1P02463 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Col4a1P02463 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
Col4a1P02463 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Col4a1P02463 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
Col4a1P02463 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC23.66■■□□□ 1.38
Col4a1P02463 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Col4a1P02463 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
Col4a1P02463 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Col4a1P02463 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
Col4a1P02463 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Col4a1P02463 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC23.65■■□□□ 1.38
Col4a1P02463 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Col4a1P02463 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Col4a1P02463 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC23.65■■□□□ 1.38
Col4a1P02463 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC23.65■■□□□ 1.38
Col4a1P02463 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Col4a1P02463 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
Col4a1P02463 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC23.64■■□□□ 1.38
Col4a1P02463 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Col4a1P02463 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Col4a1P02463 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Col4a1P02463 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Col4a1P02463 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Col4a1P02463 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Col4a1P02463 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Col4a1P02463 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Col4a1P02463 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Col4a1P02463 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC23.64■■□□□ 1.37
Col4a1P02463 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
Col4a1P02463 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Col4a1P02463 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
Col4a1P02463 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC23.63■■□□□ 1.37
Col4a1P02463 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC23.63■■□□□ 1.37
Col4a1P02463 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Col4a1P02463 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC23.63■■□□□ 1.37
Col4a1P02463 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC23.63■■□□□ 1.37
Col4a1P02463 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC23.63■■□□□ 1.37
Col4a1P02463 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
Col4a1P02463 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Col4a1P02463 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC23.62■■□□□ 1.37
Col4a1P02463 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Col4a1P02463 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Col4a1P02463 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
Col4a1P02463 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Col4a1P02463 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Col4a1P02463 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
Col4a1P02463 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC23.61■■□□□ 1.37
Col4a1P02463 Gm2399-201ENSMUST00000104944 225 ntBASIC23.61■■□□□ 1.37
Col4a1P02463 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Col4a1P02463 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Col4a1P02463 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Col4a1P02463 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC23.61■■□□□ 1.37
Col4a1P02463 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Col4a1P02463 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC23.61■■□□□ 1.37
Col4a1P02463 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC23.61■■□□□ 1.37
Col4a1P02463 Gm19094-201ENSMUST00000209791 1246 ntBASIC23.6■■□□□ 1.37
Col4a1P02463 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Col4a1P02463 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Col4a1P02463 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
Col4a1P02463 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Col4a1P02463 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Col4a1P02463 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
Col4a1P02463 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC23.6■■□□□ 1.37
Col4a1P02463 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Col4a1P02463 Mir6982-201ENSMUST00000184354 68 ntBASIC23.6■■□□□ 1.37
Col4a1P02463 Hsf1-207ENSMUST00000228371 2102 ntBASIC23.59■■□□□ 1.37
Col4a1P02463 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC23.59■■□□□ 1.37
Col4a1P02463 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Col4a1P02463 Gm2559-201ENSMUST00000201323 363 ntBASIC23.59■■□□□ 1.37
Col4a1P02463 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Col4a1P02463 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC23.59■■□□□ 1.37
Col4a1P02463 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Col4a1P02463 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Col4a1P02463 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Col4a1P02463 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Col4a1P02463 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
Col4a1P02463 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Col4a1P02463 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Col4a1P02463 Gm21596-201ENSMUST00000178049 1316 ntBASIC23.58■■□□□ 1.37
Col4a1P02463 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC23.57■■□□□ 1.36
Col4a1P02463 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Col4a1P02463 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Col4a1P02463 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Col4a1P02463 Gm44549-201ENSMUST00000208351 577 ntBASIC23.57■■□□□ 1.36
Col4a1P02463 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC23.57■■□□□ 1.36
Col4a1P02463 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC23.57■■□□□ 1.36
Col4a1P02463 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Col4a1P02463 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Col4a1P02463 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Col4a1P02463 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Col4a1P02463 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
Col4a1P02463 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC23.55■■□□□ 1.36
Col4a1P02463 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC23.55■■□□□ 1.36
Col4a1P02463 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms