Protein–RNA interactions for Protein: P02340

Tp53, Cellular tumor antigen p53, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tp53P02340 Gm13146-201ENSMUST00000118508 780 ntBASIC20.56■□□□□ 0.88
Tp53P02340 CT010467.1-202ENSMUST00000205406 714 ntBASIC20.56■□□□□ 0.88
Tp53P02340 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC20.56■□□□□ 0.88
Tp53P02340 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Tp53P02340 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC20.56■□□□□ 0.88
Tp53P02340 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Tp53P02340 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
Tp53P02340 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tp53P02340 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tp53P02340 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tp53P02340 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC20.55■□□□□ 0.88
Tp53P02340 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tp53P02340 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tp53P02340 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tp53P02340 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Tp53P02340 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Tp53P02340 Gm5784-201ENSMUST00000179344 2478 ntBASIC20.54■□□□□ 0.88
Tp53P02340 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Tp53P02340 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC20.54■□□□□ 0.88
Tp53P02340 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Tp53P02340 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC20.54■□□□□ 0.88
Tp53P02340 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tp53P02340 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tp53P02340 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Tp53P02340 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tp53P02340 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tp53P02340 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tp53P02340 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Tp53P02340 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Tp53P02340 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tp53P02340 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Tp53P02340 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC20.53■□□□□ 0.88
Tp53P02340 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Tp53P02340 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tp53P02340 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tp53P02340 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Tp53P02340 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Tp53P02340 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Tp53P02340 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Tp53P02340 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC20.52■□□□□ 0.88
Tp53P02340 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Tp53P02340 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Tp53P02340 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Tp53P02340 Reep4-203ENSMUST00000226563 1444 ntBASIC20.52■□□□□ 0.87
Tp53P02340 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Tp53P02340 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tp53P02340 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tp53P02340 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tp53P02340 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tp53P02340 Gm5874-201ENSMUST00000096101 508 ntBASIC20.51■□□□□ 0.87
Tp53P02340 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tp53P02340 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC20.51■□□□□ 0.87
Tp53P02340 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tp53P02340 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tp53P02340 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tp53P02340 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tp53P02340 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tp53P02340 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC20.5■□□□□ 0.87
Tp53P02340 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Tp53P02340 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tp53P02340 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Tp53P02340 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC20.5■□□□□ 0.87
Tp53P02340 Gm10493-201ENSMUST00000097270 612 ntBASIC20.5■□□□□ 0.87
Tp53P02340 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tp53P02340 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC20.5■□□□□ 0.87
Tp53P02340 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Tp53P02340 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tp53P02340 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Tp53P02340 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC20.49■□□□□ 0.87
Tp53P02340 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
Tp53P02340 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC20.49■□□□□ 0.87
Tp53P02340 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Tp53P02340 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Tp53P02340 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC20.49■□□□□ 0.87
Tp53P02340 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Tp53P02340 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Tp53P02340 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Tp53P02340 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Tp53P02340 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Tp53P02340 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Tp53P02340 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Tp53P02340 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Tp53P02340 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Tp53P02340 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
Tp53P02340 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Tp53P02340 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC20.48■□□□□ 0.87
Tp53P02340 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Tp53P02340 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Tp53P02340 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Tp53P02340 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Tp53P02340 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Tp53P02340 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Tp53P02340 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Tp53P02340 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC20.47■□□□□ 0.87
Tp53P02340 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Tp53P02340 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
Tp53P02340 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Tp53P02340 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Tp53P02340 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC20.47■□□□□ 0.87
Tp53P02340 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 11.5 ms