Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Igh-VJ558P01758 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC16.47■□□□□ 0.23
Igh-VJ558P01758 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Igh-VJ558P01758 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Igh-VJ558P01758 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Igh-VJ558P01758 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Igh-VJ558P01758 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Igh-VJ558P01758 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Igh-VJ558P01758 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Igh-VJ558P01758 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC16.46■□□□□ 0.23
Igh-VJ558P01758 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Igh-VJ558P01758 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Igh-VJ558P01758 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC16.46■□□□□ 0.23
Igh-VJ558P01758 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Igh-VJ558P01758 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Igh-VJ558P01758 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Igh-VJ558P01758 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Igh-VJ558P01758 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC16.46■□□□□ 0.23
Igh-VJ558P01758 Gm2011-201ENSMUST00000203124 1263 ntBASIC16.46■□□□□ 0.23
Igh-VJ558P01758 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Igh-VJ558P01758 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Igh-VJ558P01758 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Igh-VJ558P01758 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Igh-VJ558P01758 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Igh-VJ558P01758 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Igh-VJ558P01758 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Igh-VJ558P01758 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Igh-VJ558P01758 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Igh-VJ558P01758 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
Igh-VJ558P01758 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Igh-VJ558P01758 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Igh-VJ558P01758 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Igh-VJ558P01758 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Igh-VJ558P01758 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Igh-VJ558P01758 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Igh-VJ558P01758 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Igh-VJ558P01758 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC16.45■□□□□ 0.22
Igh-VJ558P01758 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC16.45■□□□□ 0.22
Igh-VJ558P01758 Gm21168-201ENSMUST00000199646 1096 ntBASIC16.45■□□□□ 0.22
Igh-VJ558P01758 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC16.45■□□□□ 0.22
Igh-VJ558P01758 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Igh-VJ558P01758 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Igh-VJ558P01758 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Igh-VJ558P01758 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Igh-VJ558P01758 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Igh-VJ558P01758 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Igh-VJ558P01758 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Igh-VJ558P01758 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Igh-VJ558P01758 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Igh-VJ558P01758 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Igh-VJ558P01758 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
Igh-VJ558P01758 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Igh-VJ558P01758 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Igh-VJ558P01758 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Igh-VJ558P01758 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Igh-VJ558P01758 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Igh-VJ558P01758 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC16.44■□□□□ 0.22
Igh-VJ558P01758 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Igh-VJ558P01758 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC16.44■□□□□ 0.22
Igh-VJ558P01758 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC16.44■□□□□ 0.22
Igh-VJ558P01758 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Igh-VJ558P01758 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Igh-VJ558P01758 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Igh-VJ558P01758 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Igh-VJ558P01758 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Igh-VJ558P01758 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC16.44■□□□□ 0.22
Igh-VJ558P01758 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Igh-VJ558P01758 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Igh-VJ558P01758 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Igh-VJ558P01758 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Igh-VJ558P01758 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Igh-VJ558P01758 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC16.43■□□□□ 0.22
Igh-VJ558P01758 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC16.43■□□□□ 0.22
Igh-VJ558P01758 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Igh-VJ558P01758 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Igh-VJ558P01758 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Igh-VJ558P01758 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC16.43■□□□□ 0.22
Igh-VJ558P01758 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC16.43■□□□□ 0.22
Igh-VJ558P01758 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Igh-VJ558P01758 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Igh-VJ558P01758 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Igh-VJ558P01758 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Igh-VJ558P01758 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Igh-VJ558P01758 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Igh-VJ558P01758 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Igh-VJ558P01758 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Igh-VJ558P01758 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Igh-VJ558P01758 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Igh-VJ558P01758 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Igh-VJ558P01758 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Igh-VJ558P01758 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Igh-VJ558P01758 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Igh-VJ558P01758 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Igh-VJ558P01758 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Igh-VJ558P01758 Gm6627-201ENSMUST00000218299 2386 ntBASIC16.42■□□□□ 0.22
Igh-VJ558P01758 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Igh-VJ558P01758 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Igh-VJ558P01758 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Igh-VJ558P01758 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Igh-VJ558P01758 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC16.41■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms