Protein–RNA interactions for Protein: O88870

Best1, Bestrophin-1, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best1O88870 Gm37352-201ENSMUST00000193908 2181 ntBASIC18.32■□□□□ 0.52
Best1O88870 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Best1O88870 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Best1O88870 Gm12441-201ENSMUST00000121806 588 ntBASIC18.31■□□□□ 0.52
Best1O88870 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Best1O88870 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Best1O88870 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
Best1O88870 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Best1O88870 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Best1O88870 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Best1O88870 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Best1O88870 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Best1O88870 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Best1O88870 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
Best1O88870 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Best1O88870 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC18.3■□□□□ 0.52
Best1O88870 Gm19094-201ENSMUST00000209791 1246 ntBASIC18.3■□□□□ 0.52
Best1O88870 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Best1O88870 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Best1O88870 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Best1O88870 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Best1O88870 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.3■□□□□ 0.52
Best1O88870 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Best1O88870 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Best1O88870 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Best1O88870 Golph3-202ENSMUST00000226517 2359 ntBASIC18.29■□□□□ 0.52
Best1O88870 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Best1O88870 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Best1O88870 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC18.29■□□□□ 0.52
Best1O88870 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Best1O88870 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Best1O88870 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Best1O88870 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Best1O88870 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Best1O88870 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Best1O88870 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Best1O88870 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Best1O88870 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Best1O88870 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Best1O88870 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Best1O88870 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Best1O88870 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC18.28■□□□□ 0.52
Best1O88870 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Best1O88870 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Best1O88870 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
Best1O88870 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Best1O88870 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Best1O88870 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Best1O88870 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
Best1O88870 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Best1O88870 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Best1O88870 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Best1O88870 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Best1O88870 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Best1O88870 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Best1O88870 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Best1O88870 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Best1O88870 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Best1O88870 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC18.27■□□□□ 0.52
Best1O88870 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC18.27■□□□□ 0.52
Best1O88870 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Best1O88870 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
Best1O88870 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Best1O88870 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
Best1O88870 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Best1O88870 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Best1O88870 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Best1O88870 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Best1O88870 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Best1O88870 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Best1O88870 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Best1O88870 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Best1O88870 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC18.26■□□□□ 0.51
Best1O88870 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
Best1O88870 Gm5408-201ENSMUST00000197998 747 ntBASIC18.26■□□□□ 0.51
Best1O88870 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Best1O88870 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Best1O88870 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Best1O88870 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Best1O88870 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Best1O88870 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
Best1O88870 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Best1O88870 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Best1O88870 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Best1O88870 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC18.25■□□□□ 0.51
Best1O88870 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Best1O88870 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
Best1O88870 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Best1O88870 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Best1O88870 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Best1O88870 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Best1O88870 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Best1O88870 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Best1O88870 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Best1O88870 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Best1O88870 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Best1O88870 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Best1O88870 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Best1O88870 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Best1O88870 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms