Protein–RNA interactions for Protein: O88632

Sema3f, Semaphorin-3F, mousemouse

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sema3fO88632 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Sema3fO88632 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
Sema3fO88632 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Sema3fO88632 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Sema3fO88632 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC21.96■■□□□ 1.11
Sema3fO88632 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Sema3fO88632 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Sema3fO88632 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Sema3fO88632 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Sema3fO88632 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Sema3fO88632 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Sema3fO88632 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Sema3fO88632 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
Sema3fO88632 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Sema3fO88632 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
Sema3fO88632 Gm5408-201ENSMUST00000197998 747 ntBASIC21.95■■□□□ 1.1
Sema3fO88632 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.1
Sema3fO88632 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Sema3fO88632 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Sema3fO88632 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Sema3fO88632 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Sema3fO88632 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC21.94■■□□□ 1.1
Sema3fO88632 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Sema3fO88632 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Sema3fO88632 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC21.94■■□□□ 1.1
Sema3fO88632 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Sema3fO88632 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Sema3fO88632 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC21.94■■□□□ 1.1
Sema3fO88632 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Sema3fO88632 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Sema3fO88632 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Sema3fO88632 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
Sema3fO88632 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC21.93■■□□□ 1.1
Sema3fO88632 Gm26524-201ENSMUST00000192339 390 ntBASIC21.93■■□□□ 1.1
Sema3fO88632 Gm37352-201ENSMUST00000193908 2181 ntBASIC21.93■■□□□ 1.1
Sema3fO88632 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC21.93■■□□□ 1.1
Sema3fO88632 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Sema3fO88632 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Sema3fO88632 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
Sema3fO88632 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
Sema3fO88632 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Sema3fO88632 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Sema3fO88632 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC21.92■■□□□ 1.1
Sema3fO88632 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Sema3fO88632 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
Sema3fO88632 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Sema3fO88632 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
Sema3fO88632 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Sema3fO88632 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Sema3fO88632 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Sema3fO88632 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
Sema3fO88632 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Sema3fO88632 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
Sema3fO88632 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
Sema3fO88632 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC21.91■■□□□ 1.1
Sema3fO88632 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Sema3fO88632 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Sema3fO88632 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC21.91■■□□□ 1.1
Sema3fO88632 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Sema3fO88632 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Sema3fO88632 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC21.91■■□□□ 1.1
Sema3fO88632 AC122769.4-201ENSMUST00000228166 901 ntBASIC21.91■■□□□ 1.1
Sema3fO88632 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC21.91■■□□□ 1.1
Sema3fO88632 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC21.91■■□□□ 1.1
Sema3fO88632 Gm37563-201ENSMUST00000192580 1513 ntBASIC21.9■■□□□ 1.1
Sema3fO88632 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Sema3fO88632 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Sema3fO88632 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
Sema3fO88632 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC21.9■■□□□ 1.1
Sema3fO88632 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Sema3fO88632 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Sema3fO88632 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
Sema3fO88632 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Sema3fO88632 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
Sema3fO88632 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Sema3fO88632 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Sema3fO88632 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Sema3fO88632 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Sema3fO88632 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Sema3fO88632 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
Sema3fO88632 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
Sema3fO88632 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Sema3fO88632 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
Sema3fO88632 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Sema3fO88632 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Sema3fO88632 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Sema3fO88632 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Sema3fO88632 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Sema3fO88632 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Sema3fO88632 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Sema3fO88632 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Sema3fO88632 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Sema3fO88632 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Sema3fO88632 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Sema3fO88632 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC21.88■■□□□ 1.09
Sema3fO88632 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC21.88■■□□□ 1.09
Sema3fO88632 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC21.88■■□□□ 1.09
Sema3fO88632 Gm20049-201ENSMUST00000219950 730 ntBASIC21.88■■□□□ 1.09
Sema3fO88632 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
Sema3fO88632 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms